RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 IGFL2Q6UWQ7 119 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 COX11Q9Y6N1 276 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 ZNF318Q5VUA4 2279 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 PI4KAP42356 2102 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 A0A087X0K7 114 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 MMP23AO75900 390 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 NCOR1P1Q9H4R4 102 aa7.82□□□□□ -1.16
COL4A6-202ENST00000372216 MYMXA0A1B0GTQ4 84 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 FAM90A2PQ658T7 463 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 DIAPH2-AS1Q14236 149 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 C8orf86Q6ZUL3 223 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 CITED1Q99966 193 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 SPRY2O43597 315 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 ARMS2P0C7Q2 107 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 PLEKHB2Q96CS7 222 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 RMI2Q96E14 147 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 LIME1Q9H400 295 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 TPSG1Q9NRR2 321 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 TPRP12270 2363 aaKnown RBP7.81□□□□□ -1.16
COL4A6-202ENST00000372216 A0A1B0GUS0 222 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 DEFB112Q30KQ8 113 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 LINC00311Q8N616 119 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 TRAV1-1A0A0B4J248 108 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 Q86TA4 180 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 ICE1Q9Y2F5 2266 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 TINCRA0A1B0GVN0 87 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 HAMPP81172 84 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 LINC00479Q96M42 142 aa7.81□□□□□ -1.16
COL4A6-202ENST00000372216 TMEM213A2RRL7 107 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 IGHV2-70P01814 119 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 IGHV4-59P01825 116 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 YPEL3P61236 119 aaPredicted RBP7.8□□□□□ -1.16
COL4A6-202ENST00000372216 C15orf65H3BRN8 121 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 GUSBP1Q15486 140 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 NUP35Q8NFH5 326 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 CRLF1O75462 422 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 AMBPP02760 352 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 WFDC11Q8NEX6 87 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 NDUFA4O00483 81 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 SLURP1P55000 103 aa7.8□□□□□ -1.16
COL4A6-202ENST00000372216 TEX48A0A1B0GUV7 120 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 ZFP36P26651 326 aaKnown RBP7.79□□□□□ -1.16
COL4A6-202ENST00000372216 BCL6BQ8N143 479 aaPredicted RBP7.79□□□□□ -1.16
COL4A6-202ENST00000372216 TMEM243Q9BU79 118 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 LINC00587B1AMM8 73 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 TRPT1Q86TN4 253 aaKnown RBP7.79□□□□□ -1.16
COL4A6-202ENST00000372216 KLF2Q9Y5W3 355 aaPredicted RBP7.79□□□□□ -1.16
COL4A6-202ENST00000372216 A0A1B0GW64 132 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 CRYGCP07315 174 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 ADORA2A-AS1P86434 159 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 LINC01551Q86U37 167 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 PDE6HQ13956 83 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 NOTCH4Q99466 2003 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 CCL24O00175 119 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 TIRAPP58753 221 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 TMEM75Q8N9X5 138 aa7.79□□□□□ -1.16
COL4A6-202ENST00000372216 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-202ENST00000372216 MORN5Q5VZ52 161 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 VPREB3Q9UKI3 123 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 LAMTOR2Q9Y2Q5 125 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 IGHV4-30-2A0A087WSY4 118 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 LINC01549A6NIU2 74 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 CFPP27918 469 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 ZNF134P52741 427 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 SPRNQ5BIV9 151 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 PRSS57Q6UWY2 283 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 PIFOQ8TCI5 191 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 ALPK2Q86TB3 2170 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 C9JAW5 83 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 HLA-DRB4P13762 266 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 TSSC4Q9Y5U2 329 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-202ENST00000372216 HLA-DRB4X5D2U9 266 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 SPTA1P02549 2419 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.78□□□□□ -1.16
COL4A6-202ENST00000372216 IGLL5B9A064 214 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 ZNF124Q15973 351 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 C5orf47Q569G3 176 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 LY6G5BQ8NDX9 201 aa7.78□□□□□ -1.16
COL4A6-202ENST00000372216 LYL1P12980 280 aa7.77□□□□□ -1.16
COL4A6-202ENST00000372216 KAAG1Q9UBP8 84 aa7.77□□□□□ -1.16
COL4A6-202ENST00000372216 IGHV4-61A0A0C4DH41 118 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 BUB3O43684 328 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 DOCK8Q8NF50 2099 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 TP53BP1Q12888 1972 aaPredicted RBP7.77□□□□□ -1.17
COL4A6-202ENST00000372216 F6UB75 175 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 GAGE2BQ13066 116 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 CTSZQ9UBR2 303 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 CXCL1P09341 107 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 VOPP1Q96AW1 172 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 PHF3Q92576 2039 aaKnown RBP7.77□□□□□ -1.17
COL4A6-202ENST00000372216 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 CHKB-CPT1BH3BT56 60 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 ELANEP08246 267 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 ZNF503Q96F45 646 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 LY96Q9Y6Y9 160 aa7.77□□□□□ -1.17
COL4A6-202ENST00000372216 I3L3M4 83 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 MED12Q93074 2177 aa7.76□□□□□ -1.17
COL4A6-202ENST00000372216 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.76□□□□□ -1.17
COL4A6-202ENST00000372216 A0A1W2PNU3 283 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 252.5 ms