RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 Q8N8P6 123 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 A0A0B4J2C4 111 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 IGFL4Q6B9Z1 124 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 COX6A1P12074 109 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 LYL1P12980 280 aa12.48□□□□□ -0.41
GTF3C4-201ENST00000372146 TRBV25-1A0A075B6N4 114 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 IGHV1OR15-1A0A075B7D0 117 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 FUSP35637 526 aaKnown RBP eCLIP12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 LTBP4Q8N2S1 1624 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 C4orf51C9J302 202 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 PROP1O75360 226 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 TAX1BP3O14907 124 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 PSG7Q13046 419 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 MRPL35Q9NZE8 188 aaKnown RBP12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 COL4A1P02462 1669 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 BRWD3Q6RI45 1802 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 LGALS9BQ3B8N2 356 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 LGALS9CQ6DKI2 356 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 DKK1O94907 266 aa12.47□□□□□ -0.41
GTF3C4-201ENST00000372146 IGKV1D-8A0A087WSZ0 117 aa12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 MRPL51Q4U2R6 128 aaKnown RBP12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 C11orf44Q8N8P7 122 aa12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 ADAMTS9Q9P2N4 1935 aa12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 KIAA1549LQ6ZVL6 1849 aa12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 ZNF493Q6ZR52 646 aa12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 WIPF2Q8TF74 440 aaPredicted RBP12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 CYYR1Q96J86 154 aa12.46□□□□□ -0.41
GTF3C4-201ENST00000372146 PCNX3Q9H6A9 2034 aa12.46□□□□□ -0.42
GTF3C4-201ENST00000372146 PRSS46E5RG02 174 aa12.46□□□□□ -0.42
GTF3C4-201ENST00000372146 LYPD1Q8N2G4 141 aa12.46□□□□□ -0.42
GTF3C4-201ENST00000372146 SMIM27A0A1W2PRY6 76 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 FGFBP3Q8TAT2 258 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 IGHV4-4A0A075B6R2 117 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 NTF4P34130 210 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 FOXI2Q6ZQN5 318 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 F8VRH5 84 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 J3QQQ9 107 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 SIGLEC8Q9NYZ4 499 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 MSRB2Q9Y3D2 182 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 IGHV3-16A0A0C4DH30 117 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 WIPF3A6NGB9 483 aa12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
GTF3C4-201ENST00000372146 CFHR3Q02985 330 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 TMEM219Q86XT9 240 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 SMIM2Q9BVW6 85 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 FBLN5Q9UBX5 448 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 CRYGBP07316 175 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 RNF183Q96D59 192 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 IGHV2-5P01817 119 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 DEFB130BP0DP73 79 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 DEFB130AP0DP74 79 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 PRSS22Q9GZN4 317 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 RNASE13Q5GAN3 156 aaKnown RBP12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 LYZL4Q96KX0 146 aa12.44□□□□□ -0.42
GTF3C4-201ENST00000372146 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 TRAV3A0A0B4J244 114 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 LHBP01229 141 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 G3V4G9 280 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 CR1LQ2VPA4 569 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 C8orf86Q6ZUL3 223 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 DKK2Q9UBU2 259 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 FAM166AQ6J272 317 aa12.43□□□□□ -0.42
GTF3C4-201ENST00000372146 IGLC7A0M8Q6 106 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 ZSWIM8A7E2V4 1837 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 KLF2Q9Y5W3 355 aaPredicted RBP12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 CDPF1Q6NVV7 123 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 GFI1Q99684 422 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 MESP1Q9BRJ9 268 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 SPAARA0A1B0GVQ0 90 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 TMEM14EPQ6UXP3 125 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 Q8NFD4 153 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 NRN1LQ496H8 165 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 PNRC2Q9NPJ4 139 aaKnown RBP12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 ICOSQ9Y6W8 199 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 SRSF7Q16629 238 aaKnown RBP eCLIP12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 CLPSL2Q6UWE3 100 aa12.42□□□□□ -0.42
GTF3C4-201ENST00000372146 C9orf139Q6ZV77 190 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 PATE3B3GLJ2 98 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 CTHRC1Q96CG8 243 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 PAQR4Q8N4S7 273 aaPredicted RBP12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 RFPL3SP0C7P2 107 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 CFC1BP0CG36 223 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 CFC1P0CG37 223 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 C10orf55Q5SWW7 151 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 TEN1Q86WV5 123 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 C17orf100A8MU93 164 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 ZFP2Q6ZN57 461 aa12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 ZNF837Q96EG3 531 aaPredicted RBP12.41□□□□□ -0.42
GTF3C4-201ENST00000372146 IGHV1-2P23083 117 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 HERVK_113P63121 156 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 PDE6HQ13956 83 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 IGKV1-9A0A0C4DH69 117 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 CLPSP04118 112 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 ATG2AQ2TAZ0 1938 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 CGB3P0DN86 165 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 IFI6P09912 130 aa12.4□□□□□ -0.42
GTF3C4-201ENST00000372146 J3QRE1 110 aa12.4□□□□□ -0.43
GTF3C4-201ENST00000372146 PCP2Q8IVA1 136 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms