RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 LINC00322Q6ZN03 302 aaPredicted RBP10.86□□□□□ -0.67
LDB3-204ENST00000372066 CCDC140Q96MF4 163 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 MS4A10Q96PG2 267 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 SLC50A1Q9BRV3 221 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 GNB4Q9HAV0 340 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 A0A1B0GW15 77 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 CLEC3BP05452 202 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 IGHV4-38-2P0DP08 117 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 SRIP30626 198 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 LINC00310P59036 64 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 KLF5Q13887 457 aaPredicted RBP10.86□□□□□ -0.67
LDB3-204ENST00000372066 REC114Q7Z4M0 266 aa10.86□□□□□ -0.67
LDB3-204ENST00000372066 NOL4LQ96MY1 436 aaPredicted RBP10.86□□□□□ -0.67
LDB3-204ENST00000372066 A6NDX4 124 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 G3V318 75 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 CDPF1Q6NVV7 123 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 BRD3OSQ6XYD6 125 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 ZC2HC1AQ96GY0 325 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 KCNS1Q96KK3 526 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 ZNF580Q9UK33 172 aa10.85□□□□□ -0.67
LDB3-204ENST00000372066 A0A1B0GUS0 222 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 BUB3O43684 328 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 NUPR1O60356 82 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 IGHG2P01859 326 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 SSTP61278 116 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 SLAQ13239 276 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 CLEC19AQ6UXS0 136 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 TMEM219Q86XT9 240 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
LDB3-204ENST00000372066 METTL26Q96S19 204 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 SAMD10Q9BYL1 202 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 CLEC5AQ9NY25 188 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 TRRAPQ9Y4A5 3859 aa10.84□□□□□ -0.67
LDB3-204ENST00000372066 RBAKDNA6NC62 111 aa10.83□□□□□ -0.68
LDB3-204ENST00000372066 A8MWP6 167 aa10.83□□□□□ -0.68
LDB3-204ENST00000372066 M0R3E3 92 aa10.83□□□□□ -0.68
LDB3-204ENST00000372066 DMRTA1Q5VZB9 504 aa10.83□□□□□ -0.68
LDB3-204ENST00000372066 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
LDB3-204ENST00000372066 GATD1Q8NB37 220 aa10.83□□□□□ -0.68
LDB3-204ENST00000372066 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
LDB3-204ENST00000372066 LINC01548A6NM66 108 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 H3BUX3 64 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 CHEK1O14757 476 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 DDTP30046 118 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 RPS20P60866 119 aaKnown RBP10.82□□□□□ -0.68
LDB3-204ENST00000372066 RIGQ13278 110 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 KIAA1644Q3SXP7 199 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 NDFIP1Q9BT67 221 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 SMAD5-AS1Q9Y6J3 95 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 U3KQE9 123 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 PKD1L1Q8TDX9 2849 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 ZNF785A8K8V0 405 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 HOXA3O43365 443 aaPredicted RBP10.82□□□□□ -0.68
LDB3-204ENST00000372066 TRGV3P03979 118 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 GPX1P07203 203 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 DEFB112Q30KQ8 113 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 GDF5OSQ5U4N7 250 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 BORCS7Q96B45 105 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 PGLYRP4Q96LB8 373 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 ALKBH7Q9BT30 221 aaPredicted RBP10.82□□□□□ -0.68
LDB3-204ENST00000372066 NAGKQ9UJ70 344 aa10.82□□□□□ -0.68
LDB3-204ENST00000372066 A0A1B0GUT8 65 aa10.81□□□□□ -0.68
LDB3-204ENST00000372066 CLPSL1A2RUU4 121 aa10.81□□□□□ -0.68
LDB3-204ENST00000372066 SH2D7A6NKC9 451 aaPredicted RBP10.81□□□□□ -0.68
LDB3-204ENST00000372066 ZNF324O75467 553 aaPredicted RBP10.81□□□□□ -0.68
LDB3-204ENST00000372066 BMI1P35226 326 aa10.81□□□□□ -0.68
LDB3-204ENST00000372066 CAMPP49913 170 aa10.81□□□□□ -0.68
LDB3-204ENST00000372066 FAM181BA6NEQ2 426 aa10.8□□□□□ -0.68
LDB3-204ENST00000372066 NDUFA4O00483 81 aa10.8□□□□□ -0.68
LDB3-204ENST00000372066 SCGB1D1O95968 90 aa10.8□□□□□ -0.68
LDB3-204ENST00000372066 APOHP02749 345 aaPredicted RBP10.8□□□□□ -0.68
LDB3-204ENST00000372066 PPIFP30405 207 aaKnown RBP10.8□□□□□ -0.68
LDB3-204ENST00000372066 AMTP48728 403 aa10.8□□□□□ -0.68
LDB3-204ENST00000372066 C9orf152Q5JTZ5 239 aa10.8□□□□□ -0.68
LDB3-204ENST00000372066 C14orf144Q96I85 54 aa10.8□□□□□ -0.68
LDB3-204ENST00000372066 PRR25Q96S07 402 aa10.8□□□□□ -0.68
LDB3-204ENST00000372066 A0A1W2PS18 150 aa10.79□□□□□ -0.68
LDB3-204ENST00000372066 F2Z2F3 143 aa10.79□□□□□ -0.68
LDB3-204ENST00000372066 ARL3P36405 182 aa10.79□□□□□ -0.68
LDB3-204ENST00000372066 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.79□□□□□ -0.68
LDB3-204ENST00000372066 Q6ZWC4 215 aa10.79□□□□□ -0.68
LDB3-204ENST00000372066 IGKV2-40A0A087WW87 121 aaPredicted RBP10.78□□□□□ -0.68
LDB3-204ENST00000372066 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.78□□□□□ -0.68
LDB3-204ENST00000372066 A0A0G2JLM5 398 aa10.78□□□□□ -0.68
LDB3-204ENST00000372066 TMEM189A5PLL7 270 aa10.78□□□□□ -0.68
LDB3-204ENST00000372066 IGKV2D-40P01614 121 aaPredicted RBP10.78□□□□□ -0.68
LDB3-204ENST00000372066 RAB4AP20338 218 aa10.78□□□□□ -0.68
LDB3-204ENST00000372066 CRIP1P50238 77 aa10.78□□□□□ -0.68
LDB3-204ENST00000372066 LCN12Q6JVE5 192 aa10.78□□□□□ -0.68
LDB3-204ENST00000372066 MRPL52Q86TS9 123 aaKnown RBP10.78□□□□□ -0.68
LDB3-204ENST00000372066 C8orf49Q96NF6 230 aa10.78□□□□□ -0.68
LDB3-204ENST00000372066 C2orf88Q9BSF0 95 aa10.78□□□□□ -0.68
LDB3-204ENST00000372066 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.68
LDB3-204ENST00000372066 IGHV3-35A0A0C4DH35 117 aa10.77□□□□□ -0.68
LDB3-204ENST00000372066 IGHG4P01861 327 aa10.77□□□□□ -0.68
LDB3-204ENST00000372066 LY6EQ16553 131 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms