RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 ATP6V0BQ99437 205 aa22.28■■□□□ 1.16
SSBP3-204ENST00000371320 IGHV4-30-2A0A087WSY4 118 aa22.27■■□□□ 1.16
SSBP3-204ENST00000371320 FABP5P3A8MUU1 101 aa22.27■■□□□ 1.16
SSBP3-204ENST00000371320 SRSF2Q01130 221 aaKnown RBP22.27■■□□□ 1.16
SSBP3-204ENST00000371320 Q6ZN92 141 aa22.27■■□□□ 1.16
SSBP3-204ENST00000371320 AP5S1Q9NUS5 200 aa22.27■■□□□ 1.16
SSBP3-204ENST00000371320 C20orf202A1L168 122 aa22.27■■□□□ 1.16
SSBP3-204ENST00000371320 ORM1P02763 201 aa22.27■■□□□ 1.16
SSBP3-204ENST00000371320 PRSS3P2Q8NHM4 247 aa22.27■■□□□ 1.16
SSBP3-204ENST00000371320 FA2HQ7L5A8 372 aa22.26■■□□□ 1.15
SSBP3-204ENST00000371320 AMN1Q8IY45 258 aa22.26■■□□□ 1.15
SSBP3-204ENST00000371320 U3KQE9 123 aa22.26■■□□□ 1.15
SSBP3-204ENST00000371320 CFAP46Q8IYW2 2715 aa22.26■■□□□ 1.15
SSBP3-204ENST00000371320 D6R8Y8 96 aa22.26■■□□□ 1.15
SSBP3-204ENST00000371320 LY6EQ16553 131 aa22.26■■□□□ 1.15
SSBP3-204ENST00000371320 HSPB8Q9UJY1 196 aa22.26■■□□□ 1.15
SSBP3-204ENST00000371320 TCAPO15273 167 aa22.25■■□□□ 1.15
SSBP3-204ENST00000371320 IGLC6P0CF74 106 aa22.25■■□□□ 1.15
SSBP3-204ENST00000371320 MAP1LC3CQ9BXW4 147 aa22.25■■□□□ 1.15
SSBP3-204ENST00000371320 U3KQK5 164 aa22.25■■□□□ 1.15
SSBP3-204ENST00000371320 OR4C46A6NHA9 309 aa22.24■■□□□ 1.15
SSBP3-204ENST00000371320 TWIST1Q15672 202 aa22.24■■□□□ 1.15
SSBP3-204ENST00000371320 BATFQ16520 125 aa22.24■■□□□ 1.15
SSBP3-204ENST00000371320 TRAV8-2A0A0B4J237 113 aa22.24■■□□□ 1.15
SSBP3-204ENST00000371320 HNRNPA3P51991 378 aaKnown RBP22.24■■□□□ 1.15
SSBP3-204ENST00000371320 C8orf86Q6ZUL3 223 aa22.24■■□□□ 1.15
SSBP3-204ENST00000371320 IL17RELQ6ZVW7 336 aa22.24■■□□□ 1.15
SSBP3-204ENST00000371320 ZNF575Q86XF7 245 aa22.24■■□□□ 1.15
SSBP3-204ENST00000371320 IGF1P05019 195 aa22.23■■□□□ 1.15
SSBP3-204ENST00000371320 RPLP1P05386 114 aaKnown RBP22.23■■□□□ 1.15
SSBP3-204ENST00000371320 IGLL1P15814 213 aa22.23■■□□□ 1.15
SSBP3-204ENST00000371320 ARL3P36405 182 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 ORMDL3Q8N138 153 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 PRELID3AQ96N28 172 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 ACACBO00763 2458 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 COL12A1Q99715 3063 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 H3BUX3 64 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 MSMBP08118 114 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 AGPAT4-IT1Q9H0P7 198 aa22.22■■□□□ 1.15
SSBP3-204ENST00000371320 TIMM8BQ9Y5J9 83 aaPredicted RBP22.22■■□□□ 1.15
SSBP3-204ENST00000371320 MRPL51Q4U2R6 128 aaKnown RBP22.21■■□□□ 1.15
SSBP3-204ENST00000371320 MRPL53Q96EL3 112 aaKnown RBP22.21■■□□□ 1.15
SSBP3-204ENST00000371320 IFI27P40305 119 aaPredicted RBP22.21■■□□□ 1.15
SSBP3-204ENST00000371320 PET117Q6UWS5 81 aa22.21■■□□□ 1.15
SSBP3-204ENST00000371320 LOC389332A0A1B0GUA5 103 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 A6NDX4 124 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 LINC01559Q495D7 138 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 TMEM78Q5T7P6 136 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 TMEM191AQ9H0A3 160 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 OR10AG1Q8NH19 301 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 SIGLEC8Q9NYZ4 499 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 VPS13CQ709C8 3753 aa22.19■■□□□ 1.14
SSBP3-204ENST00000371320 IGHG2P01859 326 aa22.18■■□□□ 1.14
SSBP3-204ENST00000371320 PSMG3-AS1Q96PY0 264 aa22.18■■□□□ 1.14
SSBP3-204ENST00000371320 HIF1ANQ9NWT6 349 aa22.18■■□□□ 1.14
SSBP3-204ENST00000371320 TSPOP30536 169 aa22.17■■□□□ 1.14
SSBP3-204ENST00000371320 TRBV12-3P01733 135 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 PPIFP30405 207 aaKnown RBP22.16■■□□□ 1.14
SSBP3-204ENST00000371320 CKS2P33552 79 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 GLMPQ8WWB7 406 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 C16orf92Q96LL3 132 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 CNFNQ9BYD5 112 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 H0Y8G0 127 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 FAM106AQ4KMX7 169 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 LAMTOR2Q9Y2Q5 125 aa22.16■■□□□ 1.14
SSBP3-204ENST00000371320 DOPEY1Q5JWR5 2465 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 H3BUA1 57 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 HIST1H1AQ02539 215 aaPredicted RBP22.15■■□□□ 1.14
SSBP3-204ENST00000371320 USMG5Q96IX5 58 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 MSRB1Q9NZV6 116 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 IGSF10Q6WRI0 2623 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 NDUFA4O00483 81 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 UNQ9165/PRO28630Q6UXU0 137 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 ZNF747Q9BV97 191 aa22.15■■□□□ 1.14
SSBP3-204ENST00000371320 BRI3O95415 125 aa22.14■■□□□ 1.13
SSBP3-204ENST00000371320 C9orf47Q6ZRZ4 202 aa22.14■■□□□ 1.13
SSBP3-204ENST00000371320 SPOCK3Q9BQ16 436 aa22.14■■□□□ 1.13
SSBP3-204ENST00000371320 ST20Q9HBF5 79 aa22.14■■□□□ 1.13
SSBP3-204ENST00000371320 MRPS16Q9Y3D3 137 aaKnown RBP22.14■■□□□ 1.13
SSBP3-204ENST00000371320 ZFHX3Q15911 3703 aa22.14■■□□□ 1.13
SSBP3-204ENST00000371320 SMKR1H3BMG3 65 aa22.13■■□□□ 1.13
SSBP3-204ENST00000371320 BLCAPP62952 87 aa22.13■■□□□ 1.13
SSBP3-204ENST00000371320 COL5A1-AS1Q5SY13 56 aa22.13■■□□□ 1.13
SSBP3-204ENST00000371320 MCRIP2Q9BUT9 160 aaKnown RBP22.13■■□□□ 1.13
SSBP3-204ENST00000371320 hDV102S1A0JD36 115 aa22.13■■□□□ 1.13
SSBP3-204ENST00000371320 B4DSR2 109 aa22.13■■□□□ 1.13
SSBP3-204ENST00000371320 LOXL1Q08397 574 aaPredicted RBP22.13■■□□□ 1.13
SSBP3-204ENST00000371320 SMAD7O15105 426 aaKnown RBP22.12■■□□□ 1.13
SSBP3-204ENST00000371320 SPG11Q96JI7 2443 aa22.12■■□□□ 1.13
SSBP3-204ENST00000371320 CELSR1Q9NYQ6 3014 aa22.12■■□□□ 1.13
SSBP3-204ENST00000371320 FLNCQ14315 2725 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 IGKV3D-20A0A0C4DH25 116 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 HSBP1L1C9JCN9 74 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 IGHV3-11P01762 117 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 PF4V1P10720 104 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 C9orf139Q6ZV77 190 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 KLK15Q9H2R5 256 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 NPYP01303 97 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 LINC01545Q5VT33 79 aa22.11■■□□□ 1.13
SSBP3-204ENST00000371320 C11orf21Q9P2W6 132 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms