RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 A0A1B0GV50 99 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 H3BQ15 152 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 H3BTX0 84 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 CXorf1O96002 111 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 AMBPP02760 352 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 IGLC2P0DOY2 106 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 LCN12Q6JVE5 192 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 FXYD5Q96DB9 178 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
VPS37B-202ENST00000371248 HIST1H1EP10412 219 aaKnown RBP13.23□□□□□ -0.29
VPS37B-202ENST00000371248 UBE2L3P68036 154 aaKnown RBP13.23□□□□□ -0.29
VPS37B-202ENST00000371248 PAFAH1B2P68402 229 aa13.23□□□□□ -0.29
VPS37B-202ENST00000371248 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.23□□□□□ -0.29
VPS37B-202ENST00000371248 BLNKQ8WV28 456 aa13.23□□□□□ -0.29
VPS37B-202ENST00000371248 K7EP13 123 aa13.22□□□□□ -0.29
VPS37B-202ENST00000371248 WIPF1O43516 503 aa13.22□□□□□ -0.29
VPS37B-202ENST00000371248 RNASE8Q8TDE3 154 aaKnown RBP13.22□□□□□ -0.29
VPS37B-202ENST00000371248 EIF5A2Q9GZV4 153 aaKnown RBP13.22□□□□□ -0.29
VPS37B-202ENST00000371248 A0A087X0K7 114 aa13.22□□□□□ -0.29
VPS37B-202ENST00000371248 NBEAP1P0C6P0 100 aa13.22□□□□□ -0.29
VPS37B-202ENST00000371248 GCHFRP30047 84 aa13.22□□□□□ -0.29
VPS37B-202ENST00000371248 SPAG8Q99932 426 aaPredicted RBP13.22□□□□□ -0.29
VPS37B-202ENST00000371248 DCANP1Q8TF63 244 aa13.21□□□□□ -0.29
VPS37B-202ENST00000371248 ZFP30Q9Y2G7 519 aa13.21□□□□□ -0.29
VPS37B-202ENST00000371248 G3V4G9 280 aa13.2□□□□□ -0.3
VPS37B-202ENST00000371248 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
VPS37B-202ENST00000371248 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
VPS37B-202ENST00000371248 VAX2Q9UIW0 290 aa13.2□□□□□ -0.3
VPS37B-202ENST00000371248 TRBV19A0A075B6N1 114 aa13.2□□□□□ -0.3
VPS37B-202ENST00000371248 C16orf92Q96LL3 132 aa13.2□□□□□ -0.3
VPS37B-202ENST00000371248 MGAM2Q2M2H8 2515 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 TGIF2-C20orf24A0A0A6YYL0 155 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 ZNF705GA8MUZ8 300 aaPredicted RBP13.19□□□□□ -0.3
VPS37B-202ENST00000371248 K7EQG2 157 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 SLC17A3O00476 420 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 ZNF256Q9Y2P7 627 aaPredicted RBP13.19□□□□□ -0.3
VPS37B-202ENST00000371248 OR4C46A6NHA9 309 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 PPBPP02775 128 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
VPS37B-202ENST00000371248 TRAV2A0A0B4J234 112 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 TRAV1-1A0A0B4J248 108 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 ZNF727A8MUV8 499 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 SOCS3O14543 225 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 NDUFB4O95168 129 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 HBE1P02100 147 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
VPS37B-202ENST00000371248 CCL20P78556 96 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 SAMD5Q5TGI4 173 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 SMIM15Q7Z3B0 74 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 TMEM242Q9NWH2 141 aa13.18□□□□□ -0.3
VPS37B-202ENST00000371248 RANP62826 216 aaKnown RBP13.17□□□□□ -0.3
VPS37B-202ENST00000371248 PDE6HQ13956 83 aa13.17□□□□□ -0.3
VPS37B-202ENST00000371248 ZNF331Q9NQX6 463 aaPredicted RBP13.17□□□□□ -0.3
VPS37B-202ENST00000371248 B4DEV8 164 aa13.17□□□□□ -0.3
VPS37B-202ENST00000371248 PSMB3P49720 205 aa13.17□□□□□ -0.3
VPS37B-202ENST00000371248 BEAN1Q3B7T3 259 aa13.17□□□□□ -0.3
VPS37B-202ENST00000371248 SLC50A1Q9BRV3 221 aa13.17□□□□□ -0.3
VPS37B-202ENST00000371248 TRAV8-2A0A0B4J237 113 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 ISLRO14498 428 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 ID1P41134 155 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 PSG9Q00887 426 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 TRBV24-1A0A075B6N3 115 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 ZNF253O75346 499 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 ZNF688P0C7X2 276 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 KRTAP10-11P60412 298 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 UBE2G2P60604 165 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 EGFEM1PQ0D2K5 195 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 TMEM241Q24JQ0 296 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 SAMD13Q5VXD3 122 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 EXOC3-AS1Q8N2X6 119 aa13.16□□□□□ -0.3
VPS37B-202ENST00000371248 CD7P09564 240 aa13.15□□□□□ -0.3
VPS37B-202ENST00000371248 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
VPS37B-202ENST00000371248 Q9H3A6 140 aa13.14□□□□□ -0.31
VPS37B-202ENST00000371248 AAMDCQ9H7C9 122 aa13.14□□□□□ -0.31
VPS37B-202ENST00000371248 NOTCH1P46531 2555 aa13.14□□□□□ -0.31
VPS37B-202ENST00000371248 ICAM4Q14773 271 aa13.14□□□□□ -0.31
VPS37B-202ENST00000371248 PSMG4Q5JS54 123 aa13.14□□□□□ -0.31
VPS37B-202ENST00000371248 C20orf173Q96LM9 149 aa13.14□□□□□ -0.31
VPS37B-202ENST00000371248 GNG13Q9P2W3 67 aa13.14□□□□□ -0.31
VPS37B-202ENST00000371248 LYPD1Q8N2G4 141 aa13.13□□□□□ -0.31
VPS37B-202ENST00000371248 NUDT10Q8NFP7 164 aa13.13□□□□□ -0.31
VPS37B-202ENST00000371248 TVP23CQ96ET8 276 aa13.13□□□□□ -0.31
VPS37B-202ENST00000371248 PRR25Q96S07 402 aa13.13□□□□□ -0.31
VPS37B-202ENST00000371248 MAP6D1Q9H9H5 199 aa13.13□□□□□ -0.31
VPS37B-202ENST00000371248 YTHDF2Q9Y5A9 579 aaKnown RBP13.13□□□□□ -0.31
VPS37B-202ENST00000371248 NBEAL1Q6ZS30 2694 aa13.13□□□□□ -0.31
VPS37B-202ENST00000371248 A0A1W2PRE2 83 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 PGPA6NDG6 321 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 PAGE4O60829 102 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 PRB4P10163 310 aaPredicted RBP13.12□□□□□ -0.31
VPS37B-202ENST00000371248 DEFB131AP59861 70 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 OR5I1Q13606 314 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 PSG3Q16557 428 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 ODF3L2Q3SX64 289 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 COL5A1-AS1Q5SY13 56 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 GTSCR1Q86UQ5 136 aa13.12□□□□□ -0.31
VPS37B-202ENST00000371248 URGCP-MRPS24S4R325 110 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms