RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PRDM6Q9NQX0 595 aa10.23□□□□□ -0.77
GPC4-201ENST00000370828 WDR81Q562E7 1941 aa10.23□□□□□ -0.77
GPC4-201ENST00000370828 ZNF407Q9C0G0 2248 aa10.22□□□□□ -0.77
GPC4-201ENST00000370828 TMEM190Q8WZ59 177 aa10.22□□□□□ -0.77
GPC4-201ENST00000370828 UCNP55089 124 aa10.22□□□□□ -0.77
GPC4-201ENST00000370828 WIPF2Q8TF74 440 aaPredicted RBP10.22□□□□□ -0.77
GPC4-201ENST00000370828 LTBP1Q14766 1721 aa10.22□□□□□ -0.77
GPC4-201ENST00000370828 FAM240AA0A1B0GVK7 77 aa10.22□□□□□ -0.77
GPC4-201ENST00000370828 NDUFB8O95169 186 aa10.22□□□□□ -0.77
GPC4-201ENST00000370828 ERCC8Q13216 396 aa10.22□□□□□ -0.77
GPC4-201ENST00000370828 IGHV1-46P01743 117 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 IGLV3-1P01715 115 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 PRR20EP86478 221 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 PRR20CP86479 221 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 PRR20DP86480 221 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 PRR20BP86481 221 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 PRR20AP86496 221 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 LYPD1Q8N2G4 141 aa10.21□□□□□ -0.77
GPC4-201ENST00000370828 EP300Q09472 2414 aaPredicted RBP10.21□□□□□ -0.78
GPC4-201ENST00000370828 PRSS46E5RG02 174 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 FGF6P10767 208 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 HLA-DRB4P13762 266 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 B3GALT5-AS1P59052 145 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 SPRR3Q9UBC9 169 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 HLA-DRB4X5D2U9 266 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 BSPH1Q075Z2 132 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 TTTY13Q9BZ97 58 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 DPH3P1Q9H4G8 78 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 TP73-AS1Q9UF72 201 aa10.21□□□□□ -0.78
GPC4-201ENST00000370828 LYNX1G3V0Z9 82 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 LYNX1P0DP58 116 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 EFNA4P52798 201 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 TMEM200BQ69YZ2 307 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 IGLL5B9A064 214 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 MORN5Q5VZ52 161 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 HELZP42694 1942 aaKnown RBP10.2□□□□□ -0.78
GPC4-201ENST00000370828 NBASA2RRP1 2371 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 VWC2LB2RUY7 222 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 YPEL4Q96NS1 127 aa10.2□□□□□ -0.78
GPC4-201ENST00000370828 TRAV26-2A0A0B4J265 109 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 PLXNA3P51805 1871 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 FXYD2P54710 66 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 SSC4DQ8WTU2 575 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 FAM120AOSQ5T036 256 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 Q8N8P6 123 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
GPC4-201ENST00000370828 TRBV25-1A0A075B6N4 114 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 A0A1B0GX51 115 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 MT-ATP8P03928 68 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 HERVK_113P63121 156 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 FXYD5Q96DB9 178 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 SHANK2-AS3Q9BTD1 123 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 SRD5A1P18405 259 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 LINC01545Q5VT33 79 aa10.19□□□□□ -0.78
GPC4-201ENST00000370828 YLPM1P49750 1951 aaKnown RBP10.18□□□□□ -0.78
GPC4-201ENST00000370828 CCL21O00585 134 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 WDR86Q86TI4 376 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 MED13LQ71F56 2210 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 DAD1P61803 113 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 TMEM75Q8N9X5 138 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 B9A039 149 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 FAM57AQ8TBR7 257 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 PRO1854Q9UHT4 67 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 SIGLEC9Q9Y336 463 aa10.18□□□□□ -0.78
GPC4-201ENST00000370828 RLFQ13129 1914 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 VCYO14598 125 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 NDUFA4L2Q9NRX3 87 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 LINC01560Q8TB33 94 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 PEMTQ9UBM1 199 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 TRBV19A0A075B6N1 114 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 ETV2O00321 342 aaPredicted RBP10.17□□□□□ -0.78
GPC4-201ENST00000370828 SOCS3O14543 225 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 HLA-DMBP28068 263 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 C17orf82Q86X59 251 aaPredicted RBP10.17□□□□□ -0.78
GPC4-201ENST00000370828 GATD1Q8NB37 220 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 IGHV1-3A0A0C4DH29 117 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 NDPQ00604 133 aa10.17□□□□□ -0.78
GPC4-201ENST00000370828 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
GPC4-201ENST00000370828 LINC00527Q9UJ94 153 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 A0A087WWL8 130 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 F8VRH5 84 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 IGHV1-8P0DP01 117 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 VPREB1P12018 145 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 C15orf32Q32M92 178 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 C3orf22Q8N5N4 141 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 GAFA1Q96PS6 74 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 TP53TG1Q9Y2A0 90 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 ZNF134P52741 427 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 SIGLEC15Q6ZMC9 328 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 ARFGEF3Q5TH69 2177 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 IGHV3-73A0A0B4J1V6 119 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 NDUFA7O95182 113 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 WT1-ASQ06250 92 aa10.16□□□□□ -0.78
GPC4-201ENST00000370828 CSDC2Q9Y534 153 aaKnown RBP10.16□□□□□ -0.78
GPC4-201ENST00000370828 ZNF503-AS2A6NEH8 195 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 SPATA12Q7Z6I5 190 aa10.15□□□□□ -0.78
GPC4-201ENST00000370828 C20orf78Q9BR46 151 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms