RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 PAX4O43316 350 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 POU2AF1Q16633 256 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 Q6ZVH6 145 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 IL17RELQ6ZVW7 336 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 PPDPFLQ8WWR9 84 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 FAM223BA6NKX1 122 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 ZNF415Q09FC8 603 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 FAM223AQ8IWN6 122 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 MRPL35Q9NZE8 188 aaKnown RBP13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 H3BUX3 64 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 THAP8Q8NA92 274 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 ANAPC1Q9H1A4 1944 aa13.71□□□□□ -0.21
PTP4A1-201ENST00000370651 NEGR1Q7Z3B1 354 aa13.71□□□□□ -0.22
PTP4A1-201ENST00000370651 NUPR1O60356 82 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 HTN3P15516 51 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 KLF5Q13887 457 aaPredicted RBP13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 Q6ZS92 163 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 H3BRN7 92 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 LY6HO94772 140 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 BRD3OSQ6XYD6 125 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 LINC00311Q8N616 119 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 TPSG1Q9NRR2 321 aa13.7□□□□□ -0.22
PTP4A1-201ENST00000370651 SIVA1O15304 175 aa13.69□□□□□ -0.22
PTP4A1-201ENST00000370651 C1orf159Q96HA4 380 aa13.69□□□□□ -0.22
PTP4A1-201ENST00000370651 C11orf68Q9H3H3 251 aaKnown RBP13.69□□□□□ -0.22
PTP4A1-201ENST00000370651 E7EQL1 145 aa13.69□□□□□ -0.22
PTP4A1-201ENST00000370651 HIST1H4AP62805 103 aaKnown RBP13.69□□□□□ -0.22
PTP4A1-201ENST00000370651 PMVKQ15126 192 aa13.69□□□□□ -0.22
PTP4A1-201ENST00000370651 ZNF747Q9BV97 191 aa13.69□□□□□ -0.22
PTP4A1-201ENST00000370651 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.68□□□□□ -0.225e-8■■■■■ 44.8
PTP4A1-201ENST00000370651 MED13LQ71F56 2210 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 IGLC1P0CG04 106 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 TRPT1Q86TN4 253 aaKnown RBP13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 PRIMA1Q86XR5 153 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 LTAP01374 205 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 CEND1Q8N111 149 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 FAM110DQ8TAY7 271 aaPredicted RBP13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 TMEM141Q96I45 108 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 GAGE12HA6NDE8 117 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 TAL2Q16559 108 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 S100A7L2Q5SY68 101 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 PRADC1Q9BSG0 188 aa13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 DAZ1Q9NQZ3 744 aaKnown RBP13.68□□□□□ -0.22
PTP4A1-201ENST00000370651 LOXP28300 417 aaPredicted RBP13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 DEFB125Q8N687 156 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 ABCA4P78363 2273 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 TRGV1A0A0A0MS02 117 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 LY6G6EA0A0G2JKS1 128 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 F8VRH5 84 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 SAA4P35542 130 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 CDKN1BP46527 198 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 TDRG1Q3Y452 100 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 U3KQA8 63 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 H3BMG7 143 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 K7EM74 188 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 OVOL3O00110 214 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 CCL25O15444 150 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 NDUFS7O75251 213 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 TRAV26-2A0A0B4J265 109 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 K7ERJ3 54 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 LEPROTO15243 131 aa13.67□□□□□ -0.22
PTP4A1-201ENST00000370651 H3BMM0 161 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 UBE2WQ96B02 151 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 DKK2Q9UBU2 259 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 DTX2Q86UW9 622 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 TRAV13-1A0A0B4J241 112 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 HLA-DRB4P13762 266 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 OVOL2Q9BRP0 275 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 SPANXA1Q9NS26 97 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 HLA-DRB4X5D2U9 266 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 ATP6V0E1O15342 81 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 C3orf36Q3SXR2 165 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 OR11H6Q8NGC7 330 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 SMIM2Q9BVW6 85 aa13.66□□□□□ -0.22
PTP4A1-201ENST00000370651 IGLV1-44P01699 117 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 TEX36Q5VZQ5 186 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 JPT2Q9H910 190 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 TCF15Q12870 199 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 Q6ZSR3 168 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 EDA2RQ9HAV5 297 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 DKK1O94907 266 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 PHLDA1Q8WV24 401 aaPredicted RBP13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 VGLL1Q99990 258 aa13.65□□□□□ -0.22
PTP4A1-201ENST00000370651 IGHV2-70DA0A0C4DH43 119 aa13.64□□□□□ -0.23
PTP4A1-201ENST00000370651 GAGE2AQ6NT46 116 aa13.64□□□□□ -0.23
PTP4A1-201ENST00000370651 FGF23Q9GZV9 251 aaPredicted RBP13.64□□□□□ -0.23
PTP4A1-201ENST00000370651 AMTNQ6UX39 209 aa13.64□□□□□ -0.23
PTP4A1-201ENST00000370651 DIAPH2-AS1Q14236 149 aa13.64□□□□□ -0.23
PTP4A1-201ENST00000370651 C8orf86Q6ZUL3 223 aa13.64□□□□□ -0.23
PTP4A1-201ENST00000370651 MALRD1Q5VYJ5 2156 aa13.64□□□□□ -0.23
PTP4A1-201ENST00000370651 SDHAF1A6NFY7 115 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 IGHV3-53P01767 116 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 FAM120AOSQ5T036 256 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 DPH3Q96FX2 82 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 AZU1P20160 251 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 PIP4P2Q8N4L2 257 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 C11orf44Q8N8P7 122 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 ATP6V0BQ99437 205 aa13.63□□□□□ -0.23
PTP4A1-201ENST00000370651 IGLV3-9A0A075B6K5 115 aa13.62□□□□□ -0.23
PTP4A1-201ENST00000370651 NOTCH4Q99466 2003 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms