RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 IGHV3-43DP0DP04 118 aa11.52□□□□□ -0.57
LMO4-201ENST00000370542 HOXD3P31249 432 aaPredicted RBP11.52□□□□□ -0.57
LMO4-201ENST00000370542 PRCDQ00LT1 54 aa11.52□□□□□ -0.57
LMO4-201ENST00000370542 SLAQ13239 276 aa11.52□□□□□ -0.57
LMO4-201ENST00000370542 FOXE3Q13461 319 aa11.52□□□□□ -0.57
LMO4-201ENST00000370542 BVES-AS1Q5T3Y7 98 aa11.52□□□□□ -0.57
LMO4-201ENST00000370542 EBLN2Q6P2I7 272 aa11.52□□□□□ -0.57
LMO4-201ENST00000370542 MAP1LC3CQ9BXW4 147 aa11.52□□□□□ -0.57
LMO4-201ENST00000370542 A0A1B0GXF2 115 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 NCBP2LA6PVI3 153 aaKnown RBP11.51□□□□□ -0.57
LMO4-201ENST00000370542 GGTLC3B5MD39 225 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 SYS1-DBNDD2H3BUS1 97 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 IGHG4P01861 327 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 TCL1AP56279 114 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 HBBP68871 147 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 FXYD3Q14802 87 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 OR4A47Q6IF82 309 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 TCF24Q7RTU0 167 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 KLHL30-AS1Q8NEE0 82 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 NUP35Q8NFH5 326 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 MYOZ3Q8TDC0 251 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 RAX2Q96IS3 184 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 B9D2Q9BPU9 175 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 OR51B2Q9Y5P1 312 aa11.51□□□□□ -0.57
LMO4-201ENST00000370542 CCL24O00175 119 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 PEX7O00628 323 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 SPINK4O60575 86 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 LEPROTL1O95214 131 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 FRMD6-AS1P0C7T7 363 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 PSMB8P28062 276 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 NDFIP1Q9BT67 221 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 WASHC3Q9Y3C0 194 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 CHTOPQ9Y3Y2 248 aaKnown RBP11.5□□□□□ -0.57
LMO4-201ENST00000370542 HYDINQ4G0P3 5121 aa11.5□□□□□ -0.57
LMO4-201ENST00000370542 HUWE1Q7Z6Z7 4374 aaKnown RBP11.49□□□□□ -0.57
LMO4-201ENST00000370542 A0A1B0GW15 77 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 UPK2O00526 184 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 UBE2L3P68036 154 aaKnown RBP11.49□□□□□ -0.57
LMO4-201ENST00000370542 FHL3Q13643 280 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 NUDT11Q96G61 164 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 RASL11BQ9BPW5 248 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 CSTL1Q9H114 145 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 IFI27L2Q9H2X8 130 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 SCRT2Q9NQ03 307 aa11.49□□□□□ -0.57
LMO4-201ENST00000370542 SACSQ9NZJ4 4579 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 A6NDN8 102 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 CBY3A6NI87 242 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 ACTL6BO94805 426 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 NUDT3O95989 172 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 PPIFP30405 207 aaKnown RBP11.48□□□□□ -0.57
LMO4-201ENST00000370542 SUB1P53999 127 aaKnown RBP eCLIP11.48□□□□□ -0.57
LMO4-201ENST00000370542 CD69Q07108 199 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 DEFB121Q5J5C9 76 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 LCN12Q6JVE5 192 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 SPATA12Q7Z6I5 190 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 AP1S3Q96PC3 154 aa11.48□□□□□ -0.57
LMO4-201ENST00000370542 COX7A2P2O60397 106 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 CIDEAO60543 219 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 PROP1O75360 226 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 ERHP84090 104 aaKnown RBP11.47□□□□□ -0.57
LMO4-201ENST00000370542 MPV17L2Q567V2 206 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 ETFRF1Q6IPR1 90 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 ZNF833PQ6ZTB9 187 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 ATOH7Q8N100 152 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 OR4A5Q8NH83 315 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 PAXXQ9BUH6 204 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 RPP21Q9H633 154 aaKnown RBP11.47□□□□□ -0.57
LMO4-201ENST00000370542 KLF12Q9Y4X4 402 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 DNAH1Q9P2D7 4330 aa11.47□□□□□ -0.57
LMO4-201ENST00000370542 IGLV1-40P01703 118 aa11.46□□□□□ -0.57
LMO4-201ENST00000370542 LCNL1Q6ZST4 164 aa11.46□□□□□ -0.57
LMO4-201ENST00000370542 NPBQ8NG41 125 aa11.46□□□□□ -0.57
LMO4-201ENST00000370542 FMC1Q96HJ9 113 aa11.46□□□□□ -0.57
LMO4-201ENST00000370542 FAM167A-AS1Q96KT0 104 aa11.46□□□□□ -0.57
LMO4-201ENST00000370542 GPR82Q96P67 336 aa11.46□□□□□ -0.57
LMO4-201ENST00000370542 DUX3Q96PT4 197 aa11.46□□□□□ -0.57
LMO4-201ENST00000370542 TRAV3A0A0B4J244 114 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 H3BRM9 83 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 SIVA1O15304 175 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 NDUFA3O95167 84 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 COX8AP10176 69 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 GPR183P32249 361 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 CRIP2P52943 208 aaPredicted RBP11.45□□□□□ -0.58
LMO4-201ENST00000370542 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
LMO4-201ENST00000370542 DEFB136Q30KP8 78 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 LCE2DQ5TA82 110 aaPredicted RBP11.45□□□□□ -0.58
LMO4-201ENST00000370542 C10orf113Q5VZT2 155 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 RBPMS2Q6ZRY4 209 aaKnown RBP11.45□□□□□ -0.58
LMO4-201ENST00000370542 BPIFA4PQ86YQ2 179 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 RITA1Q96K30 269 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 UBE2E2Q96LR5 201 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 SLC25A2Q9BXI2 301 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 ZNF430Q9H8G1 570 aaPredicted RBP11.45□□□□□ -0.58
LMO4-201ENST00000370542 ZNF355PQ9NSJ1 428 aa11.45□□□□□ -0.58
LMO4-201ENST00000370542 IGHV7-81A0A0B4J1V7 117 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms