RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CRXO43186 299 aaPredicted RBP10.75□□□□□ -0.69
COL9A1-204ENST00000370496 SLC25A5P05141 298 aaKnown RBP10.75□□□□□ -0.69
COL9A1-204ENST00000370496 FHITP49789 147 aa10.75□□□□□ -0.69
COL9A1-204ENST00000370496 DPPA3Q6W0C5 159 aa10.75□□□□□ -0.69
COL9A1-204ENST00000370496 C9orf47Q6ZRZ4 202 aa10.75□□□□□ -0.69
COL9A1-204ENST00000370496 SLC51BQ86UW2 128 aa10.75□□□□□ -0.69
COL9A1-204ENST00000370496 LINC00477Q96M19 166 aa10.75□□□□□ -0.69
COL9A1-204ENST00000370496 DIRC3C9JPN6 131 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 HBE1P02100 147 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 C1orf158Q8N1D5 194 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 IL17DQ8TAD2 202 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 Q8TAT8 98 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 SUN5Q8TC36 379 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 VGLL1Q99990 258 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 AGPAT4-IT1Q9H0P7 198 aa10.74□□□□□ -0.69
COL9A1-204ENST00000370496 RBAKDNA6NC62 111 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 NKX2-5P52952 324 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-204ENST00000370496 UBE2G2P60604 165 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 GNG5P63218 68 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 GFI1BQ5VTD9 330 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 GOLT1AQ6ZVE7 132 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 TMEM256Q8N2U0 113 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 C5orf17Q8NAS9 161 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 SFT2D1Q8WV19 159 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 NEU1Q99519 415 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 TMPRSS5Q9H3S3 457 aa10.73□□□□□ -0.69
COL9A1-204ENST00000370496 A0A1B0GV50 99 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 SMIM9A6NGZ8 99 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 GGTLC3B5MD39 225 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 RBMY1A1P0DJD3 496 aaKnown RBP10.72□□□□□ -0.69
COL9A1-204ENST00000370496 RBMY1CP0DJD4 496 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 ZNF138P52744 262 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 KIR3DS1Q14943 382 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 RBMY1FQ15415 496 aaKnown RBP10.72□□□□□ -0.69
COL9A1-204ENST00000370496 RRN3P1Q2M238 152 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 LINC01587Q99440 93 aa10.72□□□□□ -0.69
COL9A1-204ENST00000370496 LOC102723971A0A1B0GUV8 181 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 A0A1W2PRE2 83 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 K7EQM0 130 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 RAB5CP51148 216 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 EMP1P54849 157 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 PMS2P11Q13670 270 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 ZFAND6Q6FIF0 208 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 C20orf144Q9BQM9 153 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 NIPSNAP3BQ9BS92 247 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 ZNF492Q9P255 531 aa10.71□□□□□ -0.69
COL9A1-204ENST00000370496 YTHDF2Q9Y5A9 579 aaKnown RBP10.71□□□□□ -0.69
COL9A1-204ENST00000370496 TRAV12-3A0A0B4J271 114 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 SERTM2A0A1B0GWG4 89 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 C7orf71A4D174 169 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 TMEM189A5PLL7 270 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 CXorf65A6NEN9 183 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 GPX1P07203 203 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 H2AFB1P0C5Y9 115 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 SUMO1P63165 101 aaKnown RBP10.7□□□□□ -0.7
COL9A1-204ENST00000370496 C11orf45Q8TAV5 145 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 FAM19A4Q96LR4 140 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 DNAH7Q8WXX0 4024 aa10.7□□□□□ -0.7
COL9A1-204ENST00000370496 FAM74A7A6NL05 159 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 ZNF705GA8MUZ8 300 aaPredicted RBP10.69□□□□□ -0.7
COL9A1-204ENST00000370496 KLLNB2CW77 178 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 H7BYZ3 331 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 IFNA7P01567 189 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 TCRAP04437 139 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 HTN1P15515 57 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 CRISP2P16562 243 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 MBD3L1Q8WWY6 194 aa10.69□□□□□ -0.7
COL9A1-204ENST00000370496 NKX6-2Q9C056 277 aaPredicted RBP10.69□□□□□ -0.7
COL9A1-204ENST00000370496 TRAV8-1A0A0A6YYK1 113 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 TRBV7-9A0A0J9YWB2 115 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 NMBP08949 121 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 RNASE4P34096 147 aaKnown RBP10.68□□□□□ -0.7
COL9A1-204ENST00000370496 SULT1A2P50226 295 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 TAS2R60P59551 318 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 CST9LP1Q5W188 147 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 CYB561D1Q8N8Q1 229 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 ATG101Q9BSB4 218 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 NDFIP1Q9BT67 221 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 EPDR1Q9UM22 224 aa10.68□□□□□ -0.7
COL9A1-204ENST00000370496 NANOS2P60321 138 aaKnown RBP10.67□□□□□ -0.7
COL9A1-204ENST00000370496 ZFAND2AQ8N6M9 145 aa10.67□□□□□ -0.7
COL9A1-204ENST00000370496 LENEPQ9Y5L5 61 aa10.67□□□□□ -0.7
COL9A1-204ENST00000370496 ARL2-SNX15V9GYD0 113 aa10.67□□□□□ -0.7
COL9A1-204ENST00000370496 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
COL9A1-204ENST00000370496 PPT1P50897 306 aa10.66□□□□□ -0.7
COL9A1-204ENST00000370496 CASC10Q5T4H9 136 aa10.66□□□□□ -0.7
COL9A1-204ENST00000370496 PRR9Q5T870 116 aa10.66□□□□□ -0.7
COL9A1-204ENST00000370496 C16orf74Q96GX8 76 aa10.66□□□□□ -0.7
COL9A1-204ENST00000370496 SGK494Q96LW2 274 aa10.66□□□□□ -0.7
COL9A1-204ENST00000370496 CELA1Q9UNI1 258 aa10.66□□□□□ -0.7
COL9A1-204ENST00000370496 F6UZH7 168 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 PEX7O00628 323 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 PAGE4O60829 102 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 PRM2P04554 102 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 ALKAL2Q6UX46 152 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 CCDC28AQ8IWP9 274 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms