RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 IGHG4P01861 327 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 CFC1BP0CG36 223 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 CFC1P0CG37 223 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 IGLV3-21P80748 117 aaPredicted RBP6.97□□□□□ -1.29
LCA5-201ENST00000369846 QRFPP83859 136 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 PYGO2Q9BRQ0 406 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 IGHV3OR16-10A0A075B7F0 116 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 KNCNA6PVL3 124 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 PRR33A8MZF0 331 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 C2CD4DB7Z1M9 353 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 F8VRH5 84 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 TIAF1O95411 115 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 TP53TG1Q9Y2A0 90 aa6.97□□□□□ -1.29
LCA5-201ENST00000369846 DENND4AQ7Z401 1863 aa6.96□□□□□ -1.29
LCA5-201ENST00000369846 NDUFS7O75251 213 aa6.96□□□□□ -1.29
LCA5-201ENST00000369846 PRDM6Q9NQX0 595 aa6.96□□□□□ -1.29
LCA5-201ENST00000369846 ACACBO00763 2458 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 A0A087WWL8 130 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 LINC00473A8K010 186 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 RFPL3SP0C7P2 107 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 MRPL51Q4U2R6 128 aaKnown RBP6.96□□□□□ -1.3
LCA5-201ENST00000369846 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 FAM57AQ8TBR7 257 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 GFRA4Q9GZZ7 299 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 TMEM133Q9H2Q1 129 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 OTOGLQ3ZCN5 2332 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 CELSR3Q9NYQ7 3312 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 TIMM23O14925 209 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 MT-ATP8P03928 68 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 NDPQ00604 133 aa6.96□□□□□ -1.3
LCA5-201ENST00000369846 FRMPD3Q5JV73 1810 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 ATOX1O00244 68 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 PSPNO60542 156 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 PDLIM4P50479 330 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 SRSF2Q01130 221 aaKnown RBP6.95□□□□□ -1.3
LCA5-201ENST00000369846 PEMTQ9UBM1 199 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 V9GYY9 64 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 SORL1Q92673 2214 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 FAM90A9PA6NNJ1 464 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 SRRM4A7MD48 611 aaKnown RBP6.95□□□□□ -1.3
LCA5-201ENST00000369846 CENPVQ7Z7K6 275 aaPredicted RBP6.95□□□□□ -1.3
LCA5-201ENST00000369846 CHD9Q3L8U1 2897 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 EFEMP2O95967 443 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 CELA3BP08861 270 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 CECR9P0C854 216 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 CR1LQ2VPA4 569 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 DEFB124Q8NES8 71 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 EML5Q05BV3 1969 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 SMIM27A0A1W2PRY6 76 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 TM4SF5O14894 197 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 MRPL55Q7Z7F7 128 aaKnown RBP6.95□□□□□ -1.3
LCA5-201ENST00000369846 FAM168AQ92567 244 aa6.95□□□□□ -1.3
LCA5-201ENST00000369846 NDUFA12Q9UI09 145 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 PRR14LQ5THK1 2151 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 C9orf172C9J069 976 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 LYPD6BQ8NI32 183 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 ARHGAP21Q5T5U3 1957 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 J3QQQ9 107 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 Q6ZUT4 128 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 Q8N8P6 123 aa6.94□□□□□ -1.3
LCA5-201ENST00000369846 FASNP49327 2511 aaKnown RBP6.94□□□□□ -1.3
LCA5-201ENST00000369846 IGHV1-45A0A0A0MS14 117 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 HTN3P15516 51 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 LINC00312Q9Y6C7 94 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 NUP210Q8TEM1 1887 aaPredicted RBP6.93□□□□□ -1.3
LCA5-201ENST00000369846 PTPN13Q12923 2485 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 TRAV26-2A0A0B4J265 109 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 TRAV41A0A0B4J266 112 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 BAALC-AS2P0C853 105 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 SLC22A18ASQ8N1D0 253 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 U3KQE9 123 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 PFN2P35080 140 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 FOXG1P55316 489 aaPredicted RBP6.93□□□□□ -1.3
LCA5-201ENST00000369846 NDUFV3P56181 108 aaKnown RBP6.93□□□□□ -1.3
LCA5-201ENST00000369846 NOTCH4Q99466 2003 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 NBR2O15453 112 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 FAM231DQ6ZW35 169 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 ZNF492Q9P255 531 aa6.93□□□□□ -1.3
LCA5-201ENST00000369846 K7EN84 100 aa6.92□□□□□ -1.3
LCA5-201ENST00000369846 DAD1P61803 113 aa6.92□□□□□ -1.3
LCA5-201ENST00000369846 TRGV9Q99603 122 aa6.92□□□□□ -1.3
LCA5-201ENST00000369846 SCRT2Q9NQ03 307 aa6.92□□□□□ -1.3
LCA5-201ENST00000369846 VPS13AQ96RL7 3174 aa6.92□□□□□ -1.3
LCA5-201ENST00000369846 FREM1Q5H8C1 2179 aa6.92□□□□□ -1.3
LCA5-201ENST00000369846 SPAARA0A1B0GVQ0 90 aa6.92□□□□□ -1.3
LCA5-201ENST00000369846 NTN3O00634 580 aaPredicted RBP6.92□□□□□ -1.3
LCA5-201ENST00000369846 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.92□□□□□ -1.3
LCA5-201ENST00000369846 ERCC8Q13216 396 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 C20orf204Q6ZNR8 217 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 ZCCHC24Q8N2G6 241 aaKnown RBP6.91□□□□□ -1.3
LCA5-201ENST00000369846 CHCHD2Q9Y6H1 151 aaPredicted RBP6.91□□□□□ -1.3
LCA5-201ENST00000369846 TICRRQ7Z2Z1 1910 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 TRGV4A0A0C4DH28 118 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 HAX1O00165 279 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 ACYP1P07311 99 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 RNASE2P10153 161 aaKnown RBP6.91□□□□□ -1.3
LCA5-201ENST00000369846 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 ZNF493Q6ZR52 646 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 Q6ZT83 130 aa6.91□□□□□ -1.3
LCA5-201ENST00000369846 NEU4Q8WWR8 484 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms