RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 CCL1P22362 96 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 NPPCP23582 126 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 SPINT3P49223 89 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 ABCA11PQ4W5N1 156 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 KCTD18Q6PI47 426 aaPredicted RBP3.97□□□□□ -1.77
UBE3D-202ENST00000369746 LINC00114Q6XXX2 140 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 LYZL2Q7Z4W2 148 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 C1orf158Q8N1D5 194 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 ANKRD29Q8N6D5 301 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 DLX4Q92988 240 aaPredicted RBP3.97□□□□□ -1.77
UBE3D-202ENST00000369746 DCTN5Q9BTE1 182 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 A0A0D9SEW6 157 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 NEURL1O76050 574 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 AVPP01185 164 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 RBP4P02753 201 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 HERV-K104P61576 105 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 FAM19A2Q8N3H0 131 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 IL1F10Q8WWZ1 152 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 TAF15Q92804 592 aaKnown RBP eCLIP3.97□□□□□ -1.77
UBE3D-202ENST00000369746 OVOL2Q9BRP0 275 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 TAS2R4Q9NYW5 299 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 POLEQ07864 2286 aa3.97□□□□□ -1.77
UBE3D-202ENST00000369746 A0A096LNT2 108 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 OOSP1A8MZH6 123 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 NTN1O95631 604 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 CECR9P0C854 216 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 HLA-DMBP28068 263 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 RPL18AQ02543 176 aaKnown RBP3.96□□□□□ -1.78
UBE3D-202ENST00000369746 RPP25LQ8N5L8 163 aaKnown RBP3.96□□□□□ -1.78
UBE3D-202ENST00000369746 LY6G5BQ8NDX9 201 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 BRK1Q8WUW1 75 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 PBOV1Q9GZY1 135 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 CHCHD2Q9Y6H1 151 aaPredicted RBP3.96□□□□□ -1.78
UBE3D-202ENST00000369746 MED12LQ86YW9 2145 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 APCP25054 2843 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 PDCD6O75340 191 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 SRSF10O75494 262 aaKnown RBP3.96□□□□□ -1.78
UBE3D-202ENST00000369746 INAFM2P0DMQ5 153 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 INSL3P51460 131 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 RPS18P62269 152 aaKnown RBP3.96□□□□□ -1.78
UBE3D-202ENST00000369746 RPL30P62888 115 aaKnown RBP3.96□□□□□ -1.78
UBE3D-202ENST00000369746 HMGN2P46Q86SG4 172 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 LINC00596Q86U02 117 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 BORCS8Q96FH0 119 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 GPHA2Q96T91 129 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 CCL19Q99731 98 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 SLC25A2Q9BXI2 301 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 OTORQ9NRC9 128 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 C21orf62Q9NYP8 219 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 BSNQ9UPA5 3926 aa3.96□□□□□ -1.78
UBE3D-202ENST00000369746 C3orf85A0A1B0GTC6 90 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 PLAC8L1A1L4L8 177 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 LY6LH3BQJ8 138 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 GYPBP06028 91 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 PI3P19957 117 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 EBI3Q14213 229 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 ECSCRQ19T08 205 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 TREML4Q6UXN2 200 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 DGAT2L6Q6ZPD8 337 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 CEND1Q8N111 149 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 PFN4Q8NHR9 129 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 IGF2BP2-AS1Q96M15 143 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 IL36RNQ9UBH0 155 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 R4GMQ9 66 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 SSSCA1O60232 199 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 PLGLB1Q02325 96 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 ARL16Q0P5N6 197 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 C12orf74Q32Q52 190 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 ZNF718Q3SXZ3 478 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 C9orf153Q5TBE3 101 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 NFE4Q86UQ8 179 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 OR2A1Q8NGT9 310 aa3.95□□□□□ -1.78
UBE3D-202ENST00000369746 C1orf147Q96MC9 270 aaPredicted RBP3.95□□□□□ -1.78
UBE3D-202ENST00000369746 KLK5Q9Y337 293 aaPredicted RBP3.95□□□□□ -1.78
UBE3D-202ENST00000369746 ITPR2Q14571 2701 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 TCRBV4S1A1TA0A5B7 111 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 NDUFC2-KCTD14E9PQ53 114 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 J3QT63 122 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 PSMB8P28062 276 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 FOXA3P55318 350 aaPredicted RBP3.94□□□□□ -1.78
UBE3D-202ENST00000369746 ARFRP1Q13795 201 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 C15orf53Q8NAA6 179 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 RITA1Q96K30 269 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 TRAV27A0A087WT01 109 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 KNCNA6PVL3 124 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 A8MWV9 139 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 MRPS12O15235 138 aaKnown RBP3.94□□□□□ -1.78
UBE3D-202ENST00000369746 CST7O76096 145 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 DPM2O94777 84 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 PLA2G1BP04054 148 aaKnown RBP3.94□□□□□ -1.78
UBE3D-202ENST00000369746 SMCPP49901 116 aaPredicted RBP3.94□□□□□ -1.78
UBE3D-202ENST00000369746 RTL8BQ17RB0 113 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 SLC48A1Q6P1K1 146 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 ZAR1Q86SH2 424 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 C10orf126Q8N4M7 172 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 FLVCR1-AS1Q8TAF5 88 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 LIME1Q9H400 295 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 AMMECR1Q9Y4X0 333 aaPredicted RBP3.94□□□□□ -1.78
UBE3D-202ENST00000369746 HILPDAQ9Y5L2 63 aa3.94□□□□□ -1.78
UBE3D-202ENST00000369746 SVILO95425 2214 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms