RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 Q6ZWC4 215 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 ZNF680Q8NEM1 530 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 Q8TAT8 98 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 EPDR1Q9UM22 224 aa10.15□□□□□ -0.78
TPM3-211ENST00000368531 IGHV3OR16-12A0A075B7B8 117 aa10.14□□□□□ -0.79
TPM3-211ENST00000368531 TRAV8-1A0A0A6YYK1 113 aa10.14□□□□□ -0.79
TPM3-211ENST00000368531 TCRAP04437 139 aa10.14□□□□□ -0.79
TPM3-211ENST00000368531 NHLRC4P0CG21 123 aaPredicted RBP10.14□□□□□ -0.79
TPM3-211ENST00000368531 PPT1P50897 306 aa10.14□□□□□ -0.79
TPM3-211ENST00000368531 KIR3DS1Q14943 382 aa10.14□□□□□ -0.79
TPM3-211ENST00000368531 OVOL2Q9BRP0 275 aa10.14□□□□□ -0.79
TPM3-211ENST00000368531 C1QTNF4Q9BXJ3 329 aa10.14□□□□□ -0.79
TPM3-211ENST00000368531 ZNF138P52744 262 aa10.13□□□□□ -0.79
TPM3-211ENST00000368531 RNF183Q96D59 192 aa10.13□□□□□ -0.79
TPM3-211ENST00000368531 NKX6-2Q9C056 277 aaPredicted RBP10.13□□□□□ -0.79
TPM3-211ENST00000368531 MANBALQ9NQG1 85 aa10.13□□□□□ -0.79
TPM3-211ENST00000368531 ZNF492Q9P255 531 aa10.13□□□□□ -0.79
TPM3-211ENST00000368531 MEGF8Q7Z7M0 2845 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 TRAV34A0A0B4J273 112 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 RBAKDNA6NC62 111 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 K7EQM0 130 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 PEX7O00628 323 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 AMBPP02760 352 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 TSPOP30536 169 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 LEPP41159 167 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 CDKN1BP46527 198 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 ARL6IP6Q8N6S5 226 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 CYB561D1Q8N8Q1 229 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 CSNK1G2-AS1Q8NCQ2 148 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 LINC00479Q96M42 142 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 ATG101Q9BSB4 218 aa10.12□□□□□ -0.79
TPM3-211ENST00000368531 C11orf94C9JXX5 98 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 CRXO43186 299 aaPredicted RBP10.11□□□□□ -0.79
TPM3-211ENST00000368531 IFNA1P01562 189 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 RNASE4P34096 147 aaKnown RBP10.11□□□□□ -0.79
TPM3-211ENST00000368531 PRNTQ86SH4 94 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 CCDC28AQ8IWP9 274 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 IGF2BP2-AS1Q96M15 143 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 RARRES2Q99969 163 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 TMEM208Q9BTX3 173 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 U3KQK5 164 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 ARL2-SNX15V9GYD0 113 aa10.11□□□□□ -0.79
TPM3-211ENST00000368531 TRAV12-3A0A0B4J271 114 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 SERTM2A0A1B0GWG4 89 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 SCO2A0A1W2PP80 73 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 F6UZH7 168 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 INSP01308 110 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 GPX1P07203 203 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 C1orf158Q8N1D5 194 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 ODF3Q96PU9 254 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 PSG8Q9UQ74 426 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 TP53TG1Q9Y2A0 90 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 GOLT1BQ9Y3E0 138 aa10.1□□□□□ -0.79
TPM3-211ENST00000368531 RBMY1A1P0DJD3 496 aaKnown RBP10.09□□□□□ -0.79
TPM3-211ENST00000368531 RBMY1CP0DJD4 496 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 BCL2P10415 239 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 AKR1C3P42330 323 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 FLI1Q01543 452 aaPredicted RBP10.09□□□□□ -0.79
TPM3-211ENST00000368531 BTN1A1Q13410 526 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 RBMY1FQ15415 496 aaKnown RBP10.09□□□□□ -0.79
TPM3-211ENST00000368531 GFI1BQ5VTD9 330 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 ZFAND2AQ8N6M9 145 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 HIST1H2BAQ96A08 127 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 TVP23CQ96ET8 276 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 FAM19A4Q96LR4 140 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 LINC01587Q99440 93 aa10.09□□□□□ -0.79
TPM3-211ENST00000368531 C7orf71A4D174 169 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 DEFB4AO15263 64 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 IGLV2-11P01706 119 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 PRM2P04554 102 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 HTN1P15515 57 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 PRR9Q5T870 116 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 TMEM75Q8N9X5 138 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 LYPD6BQ8NI32 183 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 C8orf49Q96NF6 230 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 NDFIP1Q9BT67 221 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 TREM1Q9NP99 234 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 VAX2Q9UIW0 290 aa10.08□□□□□ -0.8
TPM3-211ENST00000368531 LOC102723971A0A1B0GUV8 181 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 RBFOX3A6NFN3 312 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 ZNF705GA8MUZ8 300 aaPredicted RBP10.07□□□□□ -0.8
TPM3-211ENST00000368531 KLLNB2CW77 178 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 NMBP08949 121 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 CRISP2P16562 243 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 UBE2G1P62253 170 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 IFITM2Q01629 132 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 MEF2BQ02080 365 aaPredicted RBP10.07□□□□□ -0.8
TPM3-211ENST00000368531 Q6ZQT7 251 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 X6R8D5 127 aa10.07□□□□□ -0.8
TPM3-211ENST00000368531 PMS2P11Q13670 270 aa10.06□□□□□ -0.8
TPM3-211ENST00000368531 TOR2AQ5JU69 321 aa10.06□□□□□ -0.8
TPM3-211ENST00000368531 ZNF705AQ6ZN79 300 aaPredicted RBP10.06□□□□□ -0.8
TPM3-211ENST00000368531 TCEAL7Q9BRU2 100 aa10.06□□□□□ -0.8
TPM3-211ENST00000368531 NIPSNAP3BQ9BS92 247 aa10.06□□□□□ -0.8
TPM3-211ENST00000368531 EIF5A2Q9GZV4 153 aaKnown RBP10.06□□□□□ -0.8
TPM3-211ENST00000368531 LENEPQ9Y5L5 61 aa10.06□□□□□ -0.8
TPM3-211ENST00000368531 A0A0J9YWU9 116 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms