RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TRAV8-1A0A0A6YYK1 113 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 S100PP25815 95 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 HLA-DMBP28068 263 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 RPS10P46783 165 aaKnown RBP7.51□□□□□ -1.21
TPM3-210ENST00000368530 ERVFC1-1P60608 527 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 PSG9Q00887 426 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 PRR27Q6MZM9 219 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 OR1N2Q8NGR9 330 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 RNASE7Q9H1E1 156 aaKnown RBP7.51□□□□□ -1.21
TPM3-210ENST00000368530 AAMDCQ9H7C9 122 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 MLXQ9UH92 298 aa7.51□□□□□ -1.21
TPM3-210ENST00000368530 LCE6AA0A183 80 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 A0A1W2PPQ1 181 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 PPP1R2P9O14990 202 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 GCGP01275 180 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 PFN1P07737 140 aaKnown RBP7.5□□□□□ -1.21
TPM3-210ENST00000368530 FAM3BP58499 235 aaPredicted RBP7.5□□□□□ -1.21
TPM3-210ENST00000368530 PDE6HQ13956 83 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 PRNTQ86SH4 94 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 LYPD1Q8N2G4 141 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 FMC1Q96HJ9 113 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 FAM210BQ96KR6 192 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 U3KQE9 123 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 LYSTQ99698 3801 aa7.5□□□□□ -1.21
TPM3-210ENST00000368530 DIRC3C9JPN6 131 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 FRMD6-AS1P0C7T7 363 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 EDN2P20800 178 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 TM4SF20Q53R12 229 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 FAM209BQ5JX69 171 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 KCNIP4Q6PIL6 250 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 Q86TA4 180 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 RNF182Q8N6D2 247 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 TMEM190Q8WZ59 177 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 KLF12Q9Y4X4 402 aa7.49□□□□□ -1.21
TPM3-210ENST00000368530 SORL1Q92673 2214 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 IGKV2-40A0A087WW87 121 aaPredicted RBP7.48□□□□□ -1.21
TPM3-210ENST00000368530 A0A087X0K7 114 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 ZNF705FA8MVS1 300 aaPredicted RBP7.48□□□□□ -1.21
TPM3-210ENST00000368530 C1orf196B1AJZ1 125 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 IGKV2D-40P01614 121 aaPredicted RBP7.48□□□□□ -1.21
TPM3-210ENST00000368530 S100A9P06702 114 aaKnown RBP7.48□□□□□ -1.21
TPM3-210ENST00000368530 LGALS1P09382 135 aaKnown RBP7.48□□□□□ -1.21
TPM3-210ENST00000368530 FOLR2P14207 255 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 CSN1S1P47710 185 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 RPEL1Q2QD12 228 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 IBA57Q5T440 356 aaKnown RBP7.48□□□□□ -1.21
TPM3-210ENST00000368530 C1orf194Q5T5A4 169 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 C16orf54Q6UWD8 224 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 GLMPQ8WWB7 406 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 DLX4Q92988 240 aaPredicted RBP7.48□□□□□ -1.21
TPM3-210ENST00000368530 GPR82Q96P67 336 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 STARD9Q9P2P6 4700 aa7.48□□□□□ -1.21
TPM3-210ENST00000368530 IGHV4OR15-8A0A075B7B6 117 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 A0A087WW49 117 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 K7EQM0 130 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 OVOL1O14753 267 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 CHEK1O14757 476 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 LTAP01374 205 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 IGLV2-11P01706 119 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 TCL1AP56279 114 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 FAM106AQ4KMX7 169 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 Q8N1Y9 231 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 GRAMD2BQ96HH9 432 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 TM2D3Q9BRN9 247 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 EDA2RQ9HAV5 297 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 ZNF331Q9NQX6 463 aaPredicted RBP7.47□□□□□ -1.21
TPM3-210ENST00000368530 OSTCQ9NRP0 149 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 IL36BQ9NZH7 164 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 PSG8Q9UQ74 426 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 V9GYV3 84 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 IGKV3-7A0A075B6H7 116 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 TRBV24-1A0A075B6N3 115 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 IGHV7-4-1A0A0J9YVY3 117 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 ZNF705GA8MUZ8 300 aaPredicted RBP7.47□□□□□ -1.21
TPM3-210ENST00000368530 GATCO43716 136 aaKnown RBP7.47□□□□□ -1.21
TPM3-210ENST00000368530 ZNF253O75346 499 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 CA1P00915 261 aaPredicted RBP7.47□□□□□ -1.21
TPM3-210ENST00000368530 RAB5BP61020 215 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 RPL11P62913 178 aaKnown RBP7.47□□□□□ -1.21
TPM3-210ENST00000368530 FLI1Q01543 452 aaPredicted RBP7.47□□□□□ -1.21
TPM3-210ENST00000368530 PSG3Q16557 428 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 TMEM75Q8N9X5 138 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 NUDT10Q8NFP7 164 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 NUDT11Q96G61 164 aa7.47□□□□□ -1.21
TPM3-210ENST00000368530 TRAV8-2A0A0B4J237 113 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 LOC105371267A0A1B0GV96 52 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 A0A1W2PS18 150 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 PRAC2D3DTV9 90 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 SLURP1P55000 103 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 SYNJ2BPP57105 145 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 LCN12Q6JVE5 192 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 LINC00322Q6ZN03 302 aaPredicted RBP7.46□□□□□ -1.22
TPM3-210ENST00000368530 C16orf92Q96LL3 132 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 VGLL1Q99990 258 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 SLC50A1Q9BRV3 221 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 MLST8Q9BVC4 326 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 RHPN1-AS1Q9BWJ2 59 aa7.46□□□□□ -1.22
TPM3-210ENST00000368530 DAZ1Q9NQZ3 744 aaKnown RBP7.46□□□□□ -1.22
TPM3-210ENST00000368530 C19orf73Q9NVV2 129 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms