RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 CSTL1Q9H114 145 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 RBAKDNA6NC62 111 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 J3KRW8 73 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 NMBP08949 121 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 TSPOP30536 169 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 LEPP41159 167 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 TOR2AQ5JU69 321 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 Q8TAT8 98 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 VGLL1Q99990 258 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 TXNDC17Q9BRA2 123 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 TM2D3Q9BRN9 247 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 NDFIP1Q9BT67 221 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 C1QTNF4Q9BXJ3 329 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 VAX2Q9UIW0 290 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 U3KQK5 164 aa9.31□□□□□ -0.92
EFNA1-201ENST00000368406 NBEAL2Q6ZNJ1 2754 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 KIR2DL5BA0A0G2JN68 375 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 KIR2DL5BA0A0G2JPC4 375 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 LOC102723971A0A1B0GUV8 181 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 SCO2A0A1W2PP80 73 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 RBFOX3A6NFN3 312 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 M0R2Z0 102 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 PDE6DO43924 150 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 ZNF138P52744 262 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 IFITM2Q01629 132 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 SPINK13Q1W4C9 94 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 C9orf47Q6ZRZ4 202 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 KIR2DL5AQ8N109 375 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 KIR2DL5BQ8NHK3 375 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 LINC00477Q96M19 166 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 SLC35B3Q9H1N7 401 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 ZMAT4Q9H898 229 aa9.3□□□□□ -0.92
EFNA1-201ENST00000368406 HUWE1Q7Z6Z7 4374 aaKnown RBP9.3□□□□□ -0.92
EFNA1-201ENST00000368406 TRAV8-1A0A0A6YYK1 113 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 UBE2CO00762 179 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 AMBPP02760 352 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 CEBPGP53567 150 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 PRNTQ86SH4 94 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 TMEM75Q8N9X5 138 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 LYPD6BQ8NI32 183 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 SGK494Q96LW2 274 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 CLUHP3Q96NS8 147 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 AGPAT4-IT1Q9H0P7 198 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 XCL2Q9UBD3 114 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 AGRNO00468 2067 aa9.29□□□□□ -0.92
EFNA1-201ENST00000368406 TRAV34A0A0B4J273 112 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 FBLL1A6NHQ2 334 aaKnown RBP9.28□□□□□ -0.92
EFNA1-201ENST00000368406 INSP01308 110 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 CT45A10P0DMU9 189 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 FLI1Q01543 452 aaPredicted RBP9.28□□□□□ -0.92
EFNA1-201ENST00000368406 PMS2P11Q13670 270 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 DEFB135Q30KP9 77 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 CCDC28AQ8IWP9 274 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 FAM210AQ96ND0 272 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 ODF3Q96PU9 254 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 RARRES2Q99969 163 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 TMEM208Q9BTX3 173 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 STAB2Q8WWQ8 2551 aa9.28□□□□□ -0.92
EFNA1-201ENST00000368406 TRAV12-2A0A075B6T6 113 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 GPX1P07203 203 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 CDKN1BP46527 198 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 ZNF506Q5JVG8 444 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 CLLU1Q5K131 121 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 AMTNQ6UX39 209 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 RCHY1Q96PM5 261 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 SPATA25Q9BR10 227 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 MED9Q9NWA0 146 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 ZNF492Q9P255 531 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 PSG8Q9UQ74 426 aa9.27□□□□□ -0.93
EFNA1-201ENST00000368406 IGHV3OR16-12A0A075B7B8 117 aa9.26□□□□□ -0.93
EFNA1-201ENST00000368406 A8MTW9 85 aa9.26□□□□□ -0.93
EFNA1-201ENST00000368406 S100A9P06702 114 aaKnown RBP9.26□□□□□ -0.93
EFNA1-201ENST00000368406 Q86TA4 180 aa9.26□□□□□ -0.93
EFNA1-201ENST00000368406 LINC00479Q96M42 142 aa9.26□□□□□ -0.93
EFNA1-201ENST00000368406 TREM1Q9NP99 234 aa9.26□□□□□ -0.93
EFNA1-201ENST00000368406 GOLT1BQ9Y3E0 138 aa9.26□□□□□ -0.93
EFNA1-201ENST00000368406 TENM3Q9P273 2699 aa9.25□□□□□ -0.93
EFNA1-201ENST00000368406 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
EFNA1-201ENST00000368406 PEA15Q15121 130 aa9.25□□□□□ -0.93
EFNA1-201ENST00000368406 IGF2BP2-AS1Q96M15 143 aa9.25□□□□□ -0.93
EFNA1-201ENST00000368406 NIPSNAP3BQ9BS92 247 aa9.25□□□□□ -0.93
EFNA1-201ENST00000368406 LENEPQ9Y5L5 61 aa9.25□□□□□ -0.93
EFNA1-201ENST00000368406 C7orf71A4D174 169 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 RGS13O14921 159 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 SPRY2O43597 315 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 RPL35P42766 123 aaKnown RBP9.24□□□□□ -0.93
EFNA1-201ENST00000368406 TMEM183BQ1AE95 376 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 ZNF674Q2M3X9 581 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 SAPCD1Q5SSQ6 148 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 Q6ZWC4 215 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 C11orf52Q96A22 123 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 WWC2-AS2Q96NR7 200 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 RETNQ9HD89 108 aa9.24□□□□□ -0.93
EFNA1-201ENST00000368406 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
EFNA1-201ENST00000368406 TRBV7-9A0A0J9YWB2 115 aa9.23□□□□□ -0.93
EFNA1-201ENST00000368406 CRISP2P16562 243 aa9.23□□□□□ -0.93
EFNA1-201ENST00000368406 BTN1A1Q13410 526 aa9.23□□□□□ -0.93
EFNA1-201ENST00000368406 GFI1BQ5VTD9 330 aa9.23□□□□□ -0.93
EFNA1-201ENST00000368406 C2CD4CQ8TF44 421 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms