RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 M0QZ24 198 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 PDE6DO43924 150 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 CLEC19AQ6UXS0 136 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 BAGE3Q86Y29 109 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 BAGE2Q86Y30 109 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 DPF1Q92782 380 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 BORCS7Q96B45 105 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 SLC25A39Q9BZJ4 359 aaPredicted RBP9.33□□□□□ -0.92
USF1-203ENST00000368021 KLK15Q9H2R5 256 aa9.33□□□□□ -0.92
USF1-203ENST00000368021 PAGE4O60829 102 aa9.32□□□□□ -0.92
USF1-203ENST00000368021 CLUHP3Q96NS8 147 aa9.32□□□□□ -0.92
USF1-203ENST00000368021 ST20Q9HBF5 79 aa9.32□□□□□ -0.92
USF1-203ENST00000368021 TRAV9-2A0A087WT02 112 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
USF1-203ENST00000368021 TRAV5A0A0B4J249 113 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 FAM181BA6NEQ2 426 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 C11orf94C9JXX5 98 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 H3BRN7 92 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 GPX1P07203 203 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 ELANEP08246 267 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 S100A7P31151 101 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 SEC11AP67812 179 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 FOXE3Q13461 319 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 ZNF329Q86UD4 541 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 RNF152Q8N8N0 203 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 ZNF414Q96IQ9 312 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 SIGMAR1Q99720 223 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 SHANK2-AS3Q9BTD1 123 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 PAXXQ9BUH6 204 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 BMPR1BO00238 502 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 RNASE1P07998 156 aaKnown RBP9.31□□□□□ -0.92
USF1-203ENST00000368021 UBE2L3P68036 154 aaKnown RBP9.31□□□□□ -0.92
USF1-203ENST00000368021 FER1L6-AS1Q8NA97 138 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 SERTAD4Q9NUC0 356 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 TMEM14CQ9P0S9 112 aa9.31□□□□□ -0.92
USF1-203ENST00000368021 A0A1W2PRE2 83 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 GP9P14770 177 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 MYOZ3Q8TDC0 251 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 FXYD5Q96DB9 178 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 KCNS1Q96KK3 526 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 GNB1LQ9BYB4 327 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 GNB4Q9HAV0 340 aa9.3□□□□□ -0.92
USF1-203ENST00000368021 ARL3P36405 182 aa9.29□□□□□ -0.92
USF1-203ENST00000368021 HINT1P49773 126 aaPredicted RBP9.29□□□□□ -0.92
USF1-203ENST00000368021 TMEM256Q8N2U0 113 aa9.29□□□□□ -0.92
USF1-203ENST00000368021 OR4F5Q8NH21 305 aa9.29□□□□□ -0.92
USF1-203ENST00000368021 AP1S3Q96PC3 154 aa9.29□□□□□ -0.92
USF1-203ENST00000368021 OR4F4Q96R69 305 aa9.29□□□□□ -0.92
USF1-203ENST00000368021 RABAC1Q9UI14 185 aa9.29□□□□□ -0.92
USF1-203ENST00000368021 YTHDF2Q9Y5A9 579 aaKnown RBP9.29□□□□□ -0.92
USF1-203ENST00000368021 LY96Q9Y6Y9 160 aa9.29□□□□□ -0.92
USF1-203ENST00000368021 PYYP10082 97 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 Q6ZSV7 163 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 BPIFA4PQ86YQ2 179 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 OR4X2Q8NGF9 303 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 CLEC5AQ9NY25 188 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 A6NDN8 102 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 NDUFA4O00483 81 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 SERF1AO75920 110 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 ATP5G3P48201 142 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 KRTDAPP60985 99 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 C10orf99Q6UWK7 81 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 LCNL1Q6ZST4 164 aa9.28□□□□□ -0.92
USF1-203ENST00000368021 IGHV3-35A0A0C4DH35 117 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 GAGE10A6NGK3 116 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 OR11H12B2RN74 326 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 TRBV12-3P01733 135 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 IGHV3-11P01762 117 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.93
USF1-203ENST00000368021 OR11H1Q8NG94 326 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 OR11H2Q8NH07 326 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 TMEM190Q8WZ59 177 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 SFRP2Q96HF1 295 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 UBE2E2Q96LR5 201 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 NRN1Q9NPD7 142 aa9.27□□□□□ -0.93
USF1-203ENST00000368021 CLPSL1A2RUU4 121 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 TAX1BP3O14907 124 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 TDRG1Q3Y452 100 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 FA2HQ7L5A8 372 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 C11orf52Q96A22 123 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 MS4A6AQ9H2W1 248 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 ANK2Q01484 3957 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 GGTLC3B5MD39 225 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
USF1-203ENST00000368021 ZNF324O75467 553 aaPredicted RBP9.26□□□□□ -0.93
USF1-203ENST00000368021 RPL7P18124 248 aaKnown RBP9.26□□□□□ -0.93
USF1-203ENST00000368021 CRYBB3P26998 211 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 RASL11AQ6T310 242 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 NEGR1Q7Z3B1 354 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 Q8N976 141 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 OR4F17Q8NGA8 305 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 METTL26Q96S19 204 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 C16orf95Q9H693 158 aa9.26□□□□□ -0.93
USF1-203ENST00000368021 J3KRW8 73 aa9.25□□□□□ -0.93
USF1-203ENST00000368021 BUB3O43684 328 aa9.25□□□□□ -0.93
USF1-203ENST00000368021 MYCNOSP40205 109 aa9.25□□□□□ -0.93
USF1-203ENST00000368021 AMTP48728 403 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms