RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ARV1Q9H2C2 271 aa9.47□□□□□ -0.89
VAMP4-202ENST00000367740 COMMD3Q9UBI1 195 aa9.47□□□□□ -0.89
VAMP4-202ENST00000367740 MTFP1Q9UDX5 166 aa9.47□□□□□ -0.89
VAMP4-202ENST00000367740 PXMP4Q9Y6I8 212 aa9.47□□□□□ -0.89
VAMP4-202ENST00000367740 IGHV1OR15-1A0A075B7D0 117 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 RNF222A6NCQ9 220 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 RGS13O14921 159 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 PITX3O75364 302 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 RAB3DO95716 219 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 OR4E1P0C645 316 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 SURF2Q15527 256 aaPredicted RBP9.46□□□□□ -0.9
VAMP4-202ENST00000367740 PRR9Q5T870 116 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 Q8N976 141 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 ARPC5LQ9BPX5 153 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 RPH3ALQ9UNE2 315 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 GPR132Q9UNW8 380 aa9.46□□□□□ -0.9
VAMP4-202ENST00000367740 TRAV8-3A0A0A6YYJ7 113 aa9.45□□□□□ -0.9
VAMP4-202ENST00000367740 IGLC2P0DOY2 106 aa9.45□□□□□ -0.9
VAMP4-202ENST00000367740 OPCMLQ14982 345 aa9.45□□□□□ -0.9
VAMP4-202ENST00000367740 C4orf46Q504U0 113 aa9.45□□□□□ -0.9
VAMP4-202ENST00000367740 S100A7AQ86SG5 101 aa9.45□□□□□ -0.9
VAMP4-202ENST00000367740 TMEM229BQ8NBD8 167 aa9.45□□□□□ -0.9
VAMP4-202ENST00000367740 SMCO3A2RU48 225 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 H3BQ15 152 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 TAS2R19P59542 299 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 SELENOTP62341 195 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 LINC00305Q7Z4B0 112 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 BPIFA4PQ86YQ2 179 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 ATP6V0E2Q8NHE4 81 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 RASL10AQ92737 203 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 RNF24Q9Y225 148 aa9.44□□□□□ -0.9
VAMP4-202ENST00000367740 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
VAMP4-202ENST00000367740 H3BP45 60 aa9.43□□□□□ -0.9
VAMP4-202ENST00000367740 HPGDSO60760 199 aa9.43□□□□□ -0.9
VAMP4-202ENST00000367740 GPX1P07203 203 aa9.43□□□□□ -0.9
VAMP4-202ENST00000367740 CRISP2P16562 243 aa9.43□□□□□ -0.9
VAMP4-202ENST00000367740 LCE1DQ5T752 114 aa9.43□□□□□ -0.9
VAMP4-202ENST00000367740 M0R3E3 92 aa9.42□□□□□ -0.9
VAMP4-202ENST00000367740 WRBO00258 174 aa9.42□□□□□ -0.9
VAMP4-202ENST00000367740 RPP30P78346 268 aaKnown RBP9.42□□□□□ -0.9
VAMP4-202ENST00000367740 SPANXN5Q5MJ07 72 aa9.42□□□□□ -0.9
VAMP4-202ENST00000367740 DAZ4Q86SG3 579 aaKnown RBP9.42□□□□□ -0.9
VAMP4-202ENST00000367740 ZFAND2AQ8N6M9 145 aa9.42□□□□□ -0.9
VAMP4-202ENST00000367740 CIB3Q96Q77 187 aaPredicted RBP9.42□□□□□ -0.9
VAMP4-202ENST00000367740 AGPAT4-IT1Q9H0P7 198 aa9.42□□□□□ -0.9
VAMP4-202ENST00000367740 DAZ3Q9NR90 486 aaKnown RBP9.42□□□□□ -0.9
VAMP4-202ENST00000367740 KCNIP3Q9Y2W7 256 aa9.42□□□□□ -0.9
VAMP4-202ENST00000367740 GATA1P15976 413 aaPredicted RBP9.41□□□□□ -0.9
VAMP4-202ENST00000367740 IZUMO2Q6UXV1 221 aa9.41□□□□□ -0.9
VAMP4-202ENST00000367740 LINC00477Q96M19 166 aa9.41□□□□□ -0.9
VAMP4-202ENST00000367740 LINC01600Q96MT4 127 aa9.41□□□□□ -0.9
VAMP4-202ENST00000367740 COX11Q9Y6N1 276 aa9.41□□□□□ -0.9
VAMP4-202ENST00000367740 IGHV3-16A0A0C4DH30 117 aa9.4□□□□□ -0.9
VAMP4-202ENST00000367740 K7EPK0 472 aa9.4□□□□□ -0.9
VAMP4-202ENST00000367740 SYNGR2O43760 224 aa9.4□□□□□ -0.9
VAMP4-202ENST00000367740 MED6O75586 246 aa9.4□□□□□ -0.9
VAMP4-202ENST00000367740 PFN1P07737 140 aaKnown RBP9.4□□□□□ -0.9
VAMP4-202ENST00000367740 LSM3P62310 102 aaKnown RBP9.4□□□□□ -0.9
VAMP4-202ENST00000367740 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.9
VAMP4-202ENST00000367740 OR4C5Q8NGB2 326 aa9.4□□□□□ -0.9
VAMP4-202ENST00000367740 OR51S1Q8NGJ8 323 aa9.4□□□□□ -0.9
VAMP4-202ENST00000367740 MRPL53Q96EL3 112 aaKnown RBP9.4□□□□□ -0.9
VAMP4-202ENST00000367740 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.4□□□□□ -0.9
VAMP4-202ENST00000367740 NMBP08949 121 aa9.39□□□□□ -0.91
VAMP4-202ENST00000367740 NEDD8Q15843 81 aa9.39□□□□□ -0.91
VAMP4-202ENST00000367740 TOR2AQ5JU69 321 aa9.39□□□□□ -0.91
VAMP4-202ENST00000367740 PXDC1Q5TGL8 231 aa9.39□□□□□ -0.91
VAMP4-202ENST00000367740 DNAJC30Q96LL9 226 aa9.39□□□□□ -0.91
VAMP4-202ENST00000367740 STRAPQ9Y3F4 350 aaKnown RBP9.39□□□□□ -0.91
VAMP4-202ENST00000367740 DISC1C4P0D8 188 aa9.38□□□□□ -0.91
VAMP4-202ENST00000367740 PANO1I0J062 215 aa9.38□□□□□ -0.91
VAMP4-202ENST00000367740 SRPXP78539 464 aa9.38□□□□□ -0.91
VAMP4-202ENST00000367740 MUC21Q5SSG8 566 aa9.38□□□□□ -0.91
VAMP4-202ENST00000367740 SPXQ9BT56 116 aa9.38□□□□□ -0.91
VAMP4-202ENST00000367740 SRRQ9GZT4 340 aa9.38□□□□□ -0.91
VAMP4-202ENST00000367740 DPH3P1Q9H4G8 78 aa9.38□□□□□ -0.91
VAMP4-202ENST00000367740 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 A0A0D9SG52 128 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 FAM25AB3EWG3 89 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 FAM25CB3EWG5 89 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 FAM25GB3EWG6 89 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 GUK1Q16774 197 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 GTSF1LQ9H1H1 148 aa9.37□□□□□ -0.91
VAMP4-202ENST00000367740 TRAV8-1A0A0A6YYK1 113 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 DUXBA0A1W2PPF3 345 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 COX7A2P2O60397 106 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 ZNF253O75346 499 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 SLC25A6P12236 298 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
VAMP4-202ENST00000367740 HSD17B11Q8NBQ5 300 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 RMI2Q96E14 147 aa9.36□□□□□ -0.91
VAMP4-202ENST00000367740 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
VAMP4-202ENST00000367740 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
VAMP4-202ENST00000367740 ANXA3P12429 323 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 TMEM183BQ1AE95 376 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 FAM122CQ6P4D5 195 aa9.35□□□□□ -0.91
VAMP4-202ENST00000367740 ZNF546Q86UE3 836 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms