RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 SPRNQ5BIV9 151 aa13.14□□□□□ -0.31
SCAF8-201ENST00000367178 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
SCAF8-201ENST00000367178 SEC11AP67812 179 aa13.14□□□□□ -0.31
SCAF8-201ENST00000367178 KIF26AQ9ULI4 1882 aaPredicted RBP13.14□□□□□ -0.31
SCAF8-201ENST00000367178 HSD52Q0P140 79 aa13.14□□□□□ -0.31
SCAF8-201ENST00000367178 C8orf49Q96NF6 230 aa13.14□□□□□ -0.31
SCAF8-201ENST00000367178 LHBP01229 141 aa13.13□□□□□ -0.31
SCAF8-201ENST00000367178 PHLDA1Q8WV24 401 aaPredicted RBP13.13□□□□□ -0.31
SCAF8-201ENST00000367178 TMEM14CQ9P0S9 112 aa13.13□□□□□ -0.31
SCAF8-201ENST00000367178 PTPN13Q12923 2485 aa13.13□□□□□ -0.31
SCAF8-201ENST00000367178 TMEM213A2RRL7 107 aa13.13□□□□□ -0.31
SCAF8-201ENST00000367178 CKS1BP61024 79 aa13.13□□□□□ -0.31
SCAF8-201ENST00000367178 CT83Q5H943 113 aa13.13□□□□□ -0.31
SCAF8-201ENST00000367178 Q71RC1 249 aaPredicted RBP13.13□□□□□ -0.31
SCAF8-201ENST00000367178 HOXA3O43365 443 aaPredicted RBP13.13□□□□□ -0.31
SCAF8-201ENST00000367178 KRTAP27-1Q3LI81 207 aa13.13□□□□□ -0.31
SCAF8-201ENST00000367178 KNCNA6PVL3 124 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 SLC25A20O43772 301 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 TNFRSF6BO95407 300 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 ELANEP08246 267 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 PLEKHB2Q96CS7 222 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 FNDC4Q9H6D8 234 aaPredicted RBP13.12□□□□□ -0.31
SCAF8-201ENST00000367178 UBE2DNLQ8IWF7 75 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 THAP8Q8NA92 274 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 PRR25Q96S07 402 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 SONP18583 2426 aaKnown RBP13.12□□□□□ -0.31
SCAF8-201ENST00000367178 TMEM238C9JI98 176 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 SYS1-DBNDD2H3BUS1 97 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 PAX2Q02962 417 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 IL15RAQ13261 267 aa13.12□□□□□ -0.31
SCAF8-201ENST00000367178 HOXB4P17483 251 aaPredicted RBP13.11□□□□□ -0.31
SCAF8-201ENST00000367178 Q6ZSR3 168 aa13.11□□□□□ -0.31
SCAF8-201ENST00000367178 GUSBP1Q15486 140 aa13.11□□□□□ -0.31
SCAF8-201ENST00000367178 hDV102S1A0JD36 115 aa13.11□□□□□ -0.31
SCAF8-201ENST00000367178 RHODO00212 210 aa13.11□□□□□ -0.31
SCAF8-201ENST00000367178 IGLC7A0M8Q6 106 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 GHRHP01286 108 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 ZC2HC1BQ5TFG8 222 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 IGHV4-61A0A0C4DH41 118 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 DEFB112Q30KQ8 113 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 KLK9Q9UKQ9 250 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 PLXNB3Q9ULL4 1909 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 PRR20EP86478 221 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 PRR20CP86479 221 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 PRR20DP86480 221 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 PRR20BP86481 221 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 PRR20AP86496 221 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 SEM1Q6ZVN7 128 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 TRPT1Q86TN4 253 aaKnown RBP13.1□□□□□ -0.31
SCAF8-201ENST00000367178 OR11H6Q8NGC7 330 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 RASL10AQ92737 203 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 C11orf68Q9H3H3 251 aaKnown RBP13.1□□□□□ -0.31
SCAF8-201ENST00000367178 C2orf16Q68DN1 1984 aa13.1□□□□□ -0.31
SCAF8-201ENST00000367178 TRAV13-1A0A0B4J241 112 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 PRSS46E5RG02 174 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 PRB1P04280 392 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 ZNF491Q8N8L2 437 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 IGHV4-59P01825 116 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 FREM1Q5H8C1 2179 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 IGHV1OR15-1A0A075B7D0 117 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 TSPAN13O95857 204 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 ZNF479Q96JC4 524 aa13.09□□□□□ -0.31
SCAF8-201ENST00000367178 ADORA2A-AS1P86434 159 aa13.08□□□□□ -0.31
SCAF8-201ENST00000367178 FAM104BQ5XKR9 115 aa13.08□□□□□ -0.31
SCAF8-201ENST00000367178 CDKN1BP46527 198 aa13.08□□□□□ -0.32
SCAF8-201ENST00000367178 FAM231DQ6ZW35 169 aa13.08□□□□□ -0.32
SCAF8-201ENST00000367178 FXYD5Q96DB9 178 aa13.08□□□□□ -0.32
SCAF8-201ENST00000367178 IGHV7-4-1A0A0J9YVY3 117 aa13.08□□□□□ -0.32
SCAF8-201ENST00000367178 VPREB3Q9UKI3 123 aa13.08□□□□□ -0.32
SCAF8-201ENST00000367178 H3BUA1 57 aa13.07□□□□□ -0.32
SCAF8-201ENST00000367178 Q0VG73 95 aa13.07□□□□□ -0.32
SCAF8-201ENST00000367178 CENPVL3A0A0U1RRI6 287 aa13.07□□□□□ -0.32
SCAF8-201ENST00000367178 C6orf226Q5I0X4 101 aa13.07□□□□□ -0.32
SCAF8-201ENST00000367178 BCL6BQ8N143 479 aaPredicted RBP13.07□□□□□ -0.32
SCAF8-201ENST00000367178 MCRIP2Q9BUT9 160 aaKnown RBP13.07□□□□□ -0.32
SCAF8-201ENST00000367178 ERG28Q9UKR5 140 aa13.07□□□□□ -0.32
SCAF8-201ENST00000367178 ZNF664Q8N3J9 261 aa13.07□□□□□ -0.32
SCAF8-201ENST00000367178 LY6G5BQ8NDX9 201 aa13.07□□□□□ -0.32
SCAF8-201ENST00000367178 TRAV12-2A0A075B6T6 113 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 S100A7L2Q5SY68 101 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 LYPD6Q86Y78 171 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 C18orf32Q8TCD1 76 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 IGHV4-30-2A0A087WSY4 118 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 M0R2P5 195 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 ANXA2RQ3ZCQ2 193 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 PAX4O43316 350 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 ZNF114Q8NC26 417 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 MYO18BQ8IUG5 2567 aa13.06□□□□□ -0.32
SCAF8-201ENST00000367178 NPC2P61916 151 aa13.05□□□□□ -0.32
SCAF8-201ENST00000367178 V9GYV3 84 aa13.05□□□□□ -0.32
SCAF8-201ENST00000367178 SSBP2P81877 361 aaPredicted RBP13.05□□□□□ -0.32
SCAF8-201ENST00000367178 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
SCAF8-201ENST00000367178 PGPEP1Q9NXJ5 209 aa13.05□□□□□ -0.32
SCAF8-201ENST00000367178 JPT2Q9H910 190 aa13.05□□□□□ -0.32
SCAF8-201ENST00000367178 TDGF1P3P51864 188 aa13.05□□□□□ -0.32
SCAF8-201ENST00000367178 SIGMAR1Q99720 223 aa13.05□□□□□ -0.32
SCAF8-201ENST00000367178 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.04□□□□□ -0.32
SCAF8-201ENST00000367178 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms