RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NEGR1Q7Z3B1 354 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 ANAPC13Q9BS18 74 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 COX6B1P14854 86 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 LRRK2Q5S007 2527 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 NPSP0C0P6 89 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 GTSCR1Q86UQ5 136 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 RIPPLY3P57055 190 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 H3BRN7 92 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 EFNA4P52798 201 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 BVES-AS1Q5T3Y7 98 aa9.47□□□□□ -0.89
CDC42BPA-202ENST00000366764 LHBP01229 141 aa9.46□□□□□ -0.89
CDC42BPA-202ENST00000366764 STPG4Q8N801 248 aa9.46□□□□□ -0.89
CDC42BPA-202ENST00000366764 TMEM141Q96I45 108 aa9.46□□□□□ -0.89
CDC42BPA-202ENST00000366764 JMJD8Q96S16 334 aa9.46□□□□□ -0.89
CDC42BPA-202ENST00000366764 TNRC6BQ9UPQ9 1833 aaKnown RBP9.46□□□□□ -0.89
CDC42BPA-202ENST00000366764 DSCR9P59020 149 aa9.46□□□□□ -0.89
CDC42BPA-202ENST00000366764 PAX2Q02962 417 aa9.46□□□□□ -0.89
CDC42BPA-202ENST00000366764 ATXN8Q156A1 80 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 NDUFS8O00217 210 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 OR11H6Q8NGC7 330 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 Q8TAT8 98 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 GAGE2BQ13066 116 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 GAGE2EQ4V326 116 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 C11orf53Q8IXP5 236 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 GAGE2DQ9UEU5 116 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 CHD8Q9HCK8 2581 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 DMRTC2Q8IXT2 367 aaPredicted RBP9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 PRR25Q96S07 402 aa9.46□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGLC1P0CG04 106 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 CD28P10747 220 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 C7orf69Q9H7B7 122 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 SRRM4A7MD48 611 aaKnown RBP9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 DTX1Q86Y01 620 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 FAM110DQ8TAY7 271 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 RCHY1Q96PM5 261 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 LENEPQ9Y5L5 61 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGHV2-70DA0A0C4DH43 119 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 P0C879 139 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 SIGLEC8Q9NYZ4 499 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGLC7A0M8Q6 106 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 CEACAM8P31997 349 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 CDKN1BP46527 198 aa9.45□□□□□ -0.9
CDC42BPA-202ENST00000366764 PRRC2AP48634 2157 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 M0R2P5 195 aa9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 C1orf122Q6ZSJ8 110 aa9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 RBAKDNA6NC62 111 aa9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 K7EP13 123 aa9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 MRPL51Q4U2R6 128 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 SLC25A16P16260 332 aa9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 ADAMTSL5Q6ZMM2 481 aa9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 CMC4P56277 68 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 LOXP28300 417 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 CD300EQ496F6 205 aaPredicted RBP9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 DAZ1Q9NQZ3 744 aaKnown RBP9.44□□□□□ -0.9
CDC42BPA-202ENST00000366764 DEFB125Q8N687 156 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 TMEM8BA6NDV4 472 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 ZC2HC1AQ96GY0 325 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 PRSS22Q9GZN4 317 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 DOPEY1Q5JWR5 2465 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 PSMB11A5LHX3 300 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 F8VRH5 84 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 C20orf78Q9BR46 151 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 RBMY1BA6NDE4 496 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 RBMY1EA6NEQ0 496 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 RBMY1DP0C7P1 496 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 RBMY1A1P0DJD3 496 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 RBMY1CP0DJD4 496 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 CSTL1Q9H114 145 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 CD24P25063 80 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 MRPL53Q96EL3 112 aaKnown RBP9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 TRAV8-4A0A0B4J246 113 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 MLANAQ16655 118 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 A0A1W2PPM0 123 aa9.43□□□□□ -0.9
CDC42BPA-202ENST00000366764 PPIFP30405 207 aaKnown RBP9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 PPDPFLQ8WWR9 84 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 PGPEP1Q9NXJ5 209 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 LINC01545Q5VT33 79 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 CKS1BP61024 79 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 LINC01587Q99440 93 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGKV3-20P01619 116 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 UBE2E1P51965 193 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 FGF23Q9GZV9 251 aaPredicted RBP9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 KLF12Q9Y4X4 402 aa9.42□□□□□ -0.9
CDC42BPA-202ENST00000366764 LYPD2Q6UXB3 125 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGHV3-11P01762 117 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 TRAV2A0A0B4J234 112 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 C14orf178Q8N769 122 aaPredicted RBP9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 LYNX1G3V0Z9 82 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 LYNX1P0DP58 116 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGFBPL1Q8WX77 278 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 ZNF747Q9BV97 191 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 IGLV2-14P01704 120 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 SMIM2Q9BVW6 85 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 E7EQL1 145 aa9.41□□□□□ -0.9
CDC42BPA-202ENST00000366764 CENPFP49454 3210 aa9.4□□□□□ -0.9
CDC42BPA-202ENST00000366764 TRBV7-9A0A0J9YWB2 115 aa9.4□□□□□ -0.9
CDC42BPA-202ENST00000366764 TRBV6-1A0A0K0K1D8 114 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms