RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PIKFYVEQ9Y2I7 2098 aa13.4□□□□□ -0.26
NID1-202ENST00000366595 TDRD15B5MCY1 1934 aaKnown RBP13.4□□□□□ -0.26
NID1-202ENST00000366595 PTPRFP10586 1907 aa13.4□□□□□ -0.26
NID1-202ENST00000366595 ATP6V0E1O15342 81 aa13.4□□□□□ -0.26
NID1-202ENST00000366595 LMO1P25800 156 aa13.4□□□□□ -0.26
NID1-202ENST00000366595 SPATA25Q9BR10 227 aa13.4□□□□□ -0.26
NID1-202ENST00000366595 RTTNQ86VV8 2226 aa13.39□□□□□ -0.27
NID1-202ENST00000366595 A0A1B0GX51 115 aa13.39□□□□□ -0.27
NID1-202ENST00000366595 PSMB8P28062 276 aa13.39□□□□□ -0.27
NID1-202ENST00000366595 ZNF833PQ6ZTB9 187 aa13.39□□□□□ -0.27
NID1-202ENST00000366595 TRIP12Q14669 1992 aaPredicted RBP13.39□□□□□ -0.27
NID1-202ENST00000366595 TRAV26-2A0A0B4J265 109 aa13.38□□□□□ -0.27
NID1-202ENST00000366595 C22orf46C9J442 243 aa13.38□□□□□ -0.27
NID1-202ENST00000366595 MCM3APO60318 1980 aa13.38□□□□□ -0.27
NID1-202ENST00000366595 ZNF747Q9BV97 191 aa13.38□□□□□ -0.27
NID1-202ENST00000366595 CLPSL1A2RUU4 121 aa13.38□□□□□ -0.27
NID1-202ENST00000366595 IGFBPL1Q8WX77 278 aa13.38□□□□□ -0.27
NID1-202ENST00000366595 LHBP01229 141 aa13.37□□□□□ -0.27
NID1-202ENST00000366595 LINC00311Q8N616 119 aa13.37□□□□□ -0.27
NID1-202ENST00000366595 VWCEQ96DN2 955 aa13.37□□□□□ -0.27
NID1-202ENST00000366595 Q8TCH9 128 aa13.37□□□□□ -0.27
NID1-202ENST00000366595 LENEPQ9Y5L5 61 aa13.37□□□□□ -0.27
NID1-202ENST00000366595 CCL25O15444 150 aa13.37□□□□□ -0.27
NID1-202ENST00000366595 CGB3P0DN86 165 aa13.37□□□□□ -0.27
NID1-202ENST00000366595 ANGP03950 147 aaKnown RBP13.36□□□□□ -0.27
NID1-202ENST00000366595 UBE2BP63146 152 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 CGB7P0DN87 165 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 MRPL53Q96EL3 112 aaKnown RBP13.36□□□□□ -0.27
NID1-202ENST00000366595 IGHV3-38A0A0C4DH36 116 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 IGHV2-70DA0A0C4DH43 119 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 CFHR3Q02985 330 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 ZNF726P1Q15940 193 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 LYPD2Q6UXB3 125 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 DKK2Q9UBU2 259 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 CACNA1IQ9P0X4 2223 aa13.36□□□□□ -0.27
NID1-202ENST00000366595 KIR2DL5BA0A0G2JN68 375 aa13.35□□□□□ -0.27
NID1-202ENST00000366595 KIR2DL5BA0A0G2JPC4 375 aa13.35□□□□□ -0.27
NID1-202ENST00000366595 KIR2DL5AQ8N109 375 aa13.35□□□□□ -0.27
NID1-202ENST00000366595 VOPP1Q96AW1 172 aa13.35□□□□□ -0.27
NID1-202ENST00000366595 ZC2HC1AQ96GY0 325 aa13.35□□□□□ -0.27
NID1-202ENST00000366595 GATA4P43694 442 aa13.35□□□□□ -0.27
NID1-202ENST00000366595 IGLL5B9A064 214 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 IGLC1P0CG04 106 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 MDS2Q8NDY4 140 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 Q9H8V8 135 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 TEN1Q86WV5 123 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 IGKV1-6A0A0C4DH72 117 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 ETDCA0A1B0GVM5 59 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 LTAP01374 205 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 LINC00205P59089 165 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 ZFP2Q6ZN57 461 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 COL8A2P25067 703 aa13.34□□□□□ -0.27
NID1-202ENST00000366595 A0A0G2JNJ9 132 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 C5orf63A6NC05 138 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 MSMBP08118 114 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 Q9UFV3 132 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 TEX48A0A1B0GUV7 120 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 RBAKDNA6NC62 111 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 CR1LQ2VPA4 569 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 DYNAPQ8N1N2 210 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 JMJD7-PLA2G4BH0Y9G9 81 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 IGHV1-69P01742 117 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 AKAP6Q13023 2319 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 MTCL1Q9Y4B5 1905 aaKnown RBP13.33□□□□□ -0.28
NID1-202ENST00000366595 FOXI2Q6ZQN5 318 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 C5orf24Q7Z6I8 188 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 C3orf56Q8N813 242 aa13.33□□□□□ -0.28
NID1-202ENST00000366595 OPRPNQ99935 248 aaPredicted RBP13.33□□□□□ -0.28
NID1-202ENST00000366595 PLXNB2O15031 1838 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.32□□□□□ -0.28
NID1-202ENST00000366595 ATP5G1P05496 136 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 H3BUA1 57 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 FXYD5Q96DB9 178 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 BPESC1Q9GZL8 116 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 RS1O15537 224 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 NREPQ16612 68 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 VSIG2Q96IQ7 327 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 ALPK2Q86TB3 2170 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
NID1-202ENST00000366595 E9PQ18 207 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 COA6Q5JTJ3 125 aaKnown RBP13.31□□□□□ -0.28
NID1-202ENST00000366595 RNF144BQ7Z419 303 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 SVIPQ8NHG7 77 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 GBF1Q92538 1859 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 COL11A1P12107 1806 aaPredicted RBP13.31□□□□□ -0.28
NID1-202ENST00000366595 KIF26BQ2KJY2 2108 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 FAM236AA0A1B0GUQ0 79 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 FAM236BA0A1B0GV22 79 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 B3GALT5-AS1P59052 145 aa13.31□□□□□ -0.28
NID1-202ENST00000366595 IGHV7-4-1A0A0J9YVY3 117 aa13.3□□□□□ -0.28
NID1-202ENST00000366595 CLPSP04118 112 aa13.3□□□□□ -0.28
NID1-202ENST00000366595 C17orf82Q86X59 251 aaPredicted RBP13.3□□□□□ -0.28
NID1-202ENST00000366595 EP300Q09472 2414 aaPredicted RBP13.3□□□□□ -0.28
NID1-202ENST00000366595 C8orf31Q8N9H6 132 aa13.3□□□□□ -0.28
NID1-202ENST00000366595 BAALCQ8WXS3 180 aa13.3□□□□□ -0.28
NID1-202ENST00000366595 ZNF581Q9P0T4 197 aa13.3□□□□□ -0.28
NID1-202ENST00000366595 ICOSQ9Y6W8 199 aa13.3□□□□□ -0.28
NID1-202ENST00000366595 TEX36Q5VZQ5 186 aa13.29□□□□□ -0.28
NID1-202ENST00000366595 RGPD3A6NKT7 1758 aaPredicted RBP13.29□□□□□ -0.28
NID1-202ENST00000366595 WIPF3A6NGB9 483 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms