RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 OR8G2PQ6IF36 304 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 Q6ZTI0 123 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 Q8N814 137 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 OR5H2Q8NGV7 314 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 DTD1Q8TEA8 209 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 TMEM263Q8WUH6 116 aaKnown RBP5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 C16orf92Q96LL3 132 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 RSG1Q9BU20 258 aa5.65□□□□□ -1.5
HMGB1P39-201ENST00000366304 A0A1B0GV90 55 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 DISC1C4P0D8 188 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 S100A11P31949 105 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 LYZP61626 148 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR2F1Q13607 317 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 SP6Q3SY56 376 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 LINC01620Q4KN68 170 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 ZNF493Q6ZR52 646 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 SCXQ7RTU7 201 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 WFDC10BQ8IUB3 73 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR8I2Q8N0Y5 310 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 THAP6Q8TBB0 222 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 RNASEH2CQ8TDP1 164 aaKnown RBP5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 PHYHIPLQ96FC7 376 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 C14orf144Q96I85 54 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 LINC00467Q9BRT7 94 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 PARD6GQ9BYG4 376 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 SMCO4Q9NRQ5 59 aa5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 CARHSP1Q9Y2V2 147 aaKnown RBP5.64□□□□□ -1.51
HMGB1P39-201ENST00000366304 DUSP14O95147 198 aaKnown RBP5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 MT-ND4LP03901 98 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 GIPP09681 153 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 METTL15P1P0C7V9 234 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 S100A2P29034 98 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 AKR1C2P52895 323 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 SNRPEP62304 92 aaKnown RBP5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 ODF1Q14990 250 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 PEA15Q15121 130 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 EIF5AL1Q6IS14 154 aaKnown RBP5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 CFAP161Q6P656 301 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 TMEM256Q8N2U0 113 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 STOML3Q8TAV4 291 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 C8orf49Q96NF6 230 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 ENY2Q9NPA8 101 aa5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 HEYLQ9NQ87 328 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P39-201ENST00000366304 IGKV1OR2-108A0A075B7D4 117 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 NAP1L6A6NFF2 107 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 PRSS3P35030 304 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 UCP3P55916 312 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 TAS2R46P59540 309 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 HIST1H1AQ02539 215 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 KLF9Q13886 244 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 GAMTQ14353 236 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 NMSQ5H8A3 153 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 TMEM182Q6ZP80 229 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR8A1Q8NGG7 326 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 DAZAP1Q96EP5 407 aaKnown RBP5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 SEC11CQ9BY50 192 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 SLC25A22Q9H936 323 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 LY96Q9Y6Y9 160 aa5.62□□□□□ -1.51
HMGB1P39-201ENST00000366304 A0A0D9SG52 128 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 FAM74A7A6NL05 159 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR5AC1P0C628 307 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 DDTP30046 118 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 AP3S2P59780 193 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 RND3P61587 244 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 RHOBP62745 196 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 RPP30P78346 268 aaKnown RBP5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 MEF2DQ14814 521 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 FAM74A3Q4VXF1 159 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 SMIM15Q7Z3B0 74 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 ZNF738Q8NE65 137 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR52E5Q8NH55 327 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 GPX8Q8TED1 209 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 C15orf40Q8WUR7 153 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 GGACTQ9BVM4 153 aa5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 GPN1Q9HCN4 374 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P39-201ENST00000366304 C3orf85A0A1B0GTC6 90 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 ZFP92A6NM28 416 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 SNRPGP15A8MWD9 76 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 H7BYZ3 331 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 ZNF324O75467 553 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 ADAP1O75689 374 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 CFDP00746 253 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 GALR1P47211 349 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 PIGPP57054 158 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 MRPS10P82664 201 aaKnown RBP5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 DAZ2Q13117 558 aaKnown RBP5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 GFI1BQ5VTD9 330 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 LPCAT3Q6P1A2 487 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 ATRAIDQ6UW56 229 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 C11orf72Q8NBR9 251 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR11H4Q8NGC9 324 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR2T35Q8NGX2 323 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR1S1Q8NH92 325 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 TERB2Q8NHR7 220 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 CACNG5Q9UF02 275 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 ICOSQ9Y6W8 199 aa5.6□□□□□ -1.51
HMGB1P39-201ENST00000366304 TRAV9-2A0A087WT02 112 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms