RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 IGHG4P01861 327 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 HLA-DRB1P01911 266 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 RBP4P02753 201 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TRGV3P03979 118 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 IGKV1-16P04430 117 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 SLC25A5P05141 298 aaKnown RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 ELANEP08246 267 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OR9G9P0C7N8 305 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 RBMY1DP0C7P1 496 aaKnown RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 SAA2P0DJI9 122 aaPredicted RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 CT45A10P0DMU9 189 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 MYOD1P15172 320 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 NTF3P20783 257 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 CBLN1P23435 193 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PSMB8P28062 276 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 BMI1P35226 326 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 AMTP48728 403 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 CAMPP49913 170 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PTTG1IPP53801 180 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 MFAP4P55083 255 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 FOXA3P55318 350 aaPredicted RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 RPS20P60866 119 aaKnown RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 NUTF2P61970 127 aaKnown RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PRR20EP86478 221 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PRR20CP86479 221 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PRR20DP86480 221 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PRR20BP86481 221 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PRR20AP86496 221 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 NDPQ00604 133 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PRCDQ00LT1 54 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 CFHR3Q02985 330 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 UBE2V1Q13404 147 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OR5I1Q13606 314 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 KLF5Q13887 457 aaPredicted RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 EBI3Q14213 229 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 FXYD3Q14802 87 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 VAMP3Q15836 100 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 BATFQ16520 125 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PRSS8Q16651 343 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 C5orf64Q2M2E5 130 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 GCSAMLQ5JQS6 135 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TOMM20LQ6UXN7 152 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 Q6ZN92 141 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TMEM136Q6ZRR5 245 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 RBPMS2Q6ZRY4 209 aaKnown RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 FAM231DQ6ZW35 169 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 MIR17HGQ75NE6 70 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 SSX7Q7RTT5 188 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 SMIM15Q7Z3B0 74 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 LINC00305Q7Z4B0 112 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 ATP5L2Q7Z4Y8 100 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 BPIFA4PQ86YQ2 179 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 VKORC1L1Q8N0U8 176 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OR8I2Q8N0Y5 310 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 LINC00311Q8N616 119 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 Q8N6K4 173 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 ARL6IP6Q8N6S5 226 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TMEM116Q8NCL8 245 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 ZNF738Q8NE65 137 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OR4B1Q8NGF8 309 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OR5AN1Q8NGI8 311 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OR1B1Q8NGR6 318 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OR10AG1Q8NH19 301 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TMEM167AQ8TBQ9 72 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 ORAOV1Q8WV07 137 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 C4orf3Q8WVX3 66 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 DDB2Q92466 427 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 C11orf52Q96A22 123 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 FMC1Q96HJ9 113 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 UBE2E2Q96LR5 201 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 NEU1Q99519 415 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TRGV9Q99603 122 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 MGST2Q99735 147 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 SRSF8Q9BRL6 282 aaKnown RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 ALKBH7Q9BT30 221 aaPredicted RBP1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TMEM70Q9BUB7 260 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TMEM191AQ9H0A3 160 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 MS4A6AQ9H2W1 248 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 AAMDCQ9H7C9 122 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 SLC25A22Q9H936 323 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 EDA2RQ9HAV5 297 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 ST20Q9HBF5 79 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 OTORQ9NRC9 128 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TPSG1Q9NRR2 321 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 PPP1R14DQ9NXH3 145 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 CLEC5AQ9NY25 188 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 TMEM14CQ9P0S9 112 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 HIGD1AQ9Y241 93 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 LAMTOR2Q9Y2Q5 125 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 WASHC3Q9Y3C0 194 aa1.17□□□□□ -2.22
RNU1-42P-201ENST00000364033 STAB2Q8WWQ8 2551 aa1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 SORL1Q92673 2214 aa1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 STARD9Q9P2P6 4700 aa1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 HUWE1Q7Z6Z7 4374 aaKnown RBP1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 CSMD3Q7Z407 3707 aa1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 IGKV3-7A0A075B6H7 116 aa1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 IGHV3OR16-8A0A075B7F1 116 aa1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 LOC102724200A0A096LPH7 203 aaPredicted RBP1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 IGHV3-49A0A0A0MS15 119 aa1.16□□□□□ -2.22
RNU1-42P-201ENST00000364033 A0A0J9YWU9 116 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms