RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CHTOPQ9Y3Y2 248 aaKnown RBP11.06□□□□□ -0.64
COL6A1-201ENST00000361866 TRAV26-2A0A0B4J265 109 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 TMEM8BA6NDV4 472 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 HAX1O00165 279 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 HOXA3O43365 443 aaPredicted RBP11.06□□□□□ -0.64
COL6A1-201ENST00000361866 ID1P41134 155 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 LAGE3Q14657 143 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 ADAMTSL5Q6ZMM2 481 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
COL6A1-201ENST00000361866 IGHV3OR16-12A0A075B7B8 117 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 GDF5OSQ5U4N7 250 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 WIPF2Q8TF74 440 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-201ENST00000361866 NDUFB8O95169 186 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 LTAP01374 205 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 Q6ZS92 163 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 CTSZQ9UBR2 303 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 DKK4Q9UBT3 224 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 CHD9Q3L8U1 2897 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 C9orf118A6NHY6 69 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 KLF5Q13887 457 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-201ENST00000361866 PRR30Q53SZ7 412 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-201ENST00000361866 LINC00322Q6ZN03 302 aaPredicted RBP11.05□□□□□ -0.64
COL6A1-201ENST00000361866 SPRY2O43597 315 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 IGLV2-8P01709 118 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 NUP37Q8NFH4 326 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 VGLL1Q99990 258 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
COL6A1-201ENST00000361866 TLN2Q9Y4G6 2542 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 LYPD1Q8N2G4 141 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 THAP8Q8NA92 274 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 DNAH14Q0VDD8 3507 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 CEACAM4O75871 244 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 CD7P09564 240 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 GATA1P15976 413 aaPredicted RBP11.04□□□□□ -0.64
COL6A1-201ENST00000361866 PLA2G2CQ5R387 149 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 VMO1Q7Z5L0 202 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 PRR25Q96S07 402 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 ARHGAP32A7KAX9 2087 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 CSTL1Q9H114 145 aa11.04□□□□□ -0.64
COL6A1-201ENST00000361866 SNCGO76070 127 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 LHBP01229 141 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 SONP18583 2426 aaKnown RBP11.03□□□□□ -0.64
COL6A1-201ENST00000361866 CCDC168Q8NDH2 2452 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 H3BRM9 83 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 MSRB1Q9NZV6 116 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 PSMB11A5LHX3 300 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 EFNA4P52798 201 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 ZNF491Q8N8L2 437 aa11.03□□□□□ -0.64
COL6A1-201ENST00000361866 TAX1BP3O14907 124 aa11.02□□□□□ -0.64
COL6A1-201ENST00000361866 COX6CP09669 75 aa11.02□□□□□ -0.64
COL6A1-201ENST00000361866 LY6DQ14210 128 aa11.02□□□□□ -0.64
COL6A1-201ENST00000361866 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.65
COL6A1-201ENST00000361866 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
COL6A1-201ENST00000361866 K7EM74 188 aa11.02□□□□□ -0.65
COL6A1-201ENST00000361866 PSMG4Q5JS54 123 aa11.02□□□□□ -0.65
COL6A1-201ENST00000361866 TEX36Q5VZQ5 186 aa11.02□□□□□ -0.65
COL6A1-201ENST00000361866 MRPL35Q9NZE8 188 aaKnown RBP11.02□□□□□ -0.65
COL6A1-201ENST00000361866 TRAV2A0A0B4J234 112 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 IGKV3D-20A0A0C4DH25 116 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 FAM106AQ4KMX7 169 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 TSSC4Q9Y5U2 329 aaPredicted RBP11.01□□□□□ -0.65
COL6A1-201ENST00000361866 TRAV8-2A0A0B4J237 113 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 PRSS46E5RG02 174 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 GP9P14770 177 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 TEX29Q8N6K0 151 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 G3V318 75 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 H3BMG7 143 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 NDUFS7O75251 213 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 LINC00310P59036 64 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 ORMDL2Q53FV1 153 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 SYT8Q8NBV8 401 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 PRSS33Q8NF86 280 aa11.01□□□□□ -0.65
COL6A1-201ENST00000361866 TRAV21A0A0B4J279 112 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 A0A0U1RRA0 63 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 EGR2P11161 476 aaPredicted RBP11□□□□□ -0.65
COL6A1-201ENST00000361866 PAX8Q06710 450 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 LGALS9BQ3B8N2 356 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 LGALS9CQ6DKI2 356 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 NEU4Q8WWR8 484 aaPredicted RBP11□□□□□ -0.65
COL6A1-201ENST00000361866 PRO3102Q9H379 93 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 EIF4EBP1Q13541 118 aaPredicted RBP11□□□□□ -0.65
COL6A1-201ENST00000361866 SMPXQ9UHP9 88 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 AZU1P20160 251 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 SIGLEC15Q6ZMC9 328 aa11□□□□□ -0.65
COL6A1-201ENST00000361866 CRXO43186 299 aaPredicted RBP10.99□□□□□ -0.65
COL6A1-201ENST00000361866 IGHV4-39P01824 125 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 PDE6HQ13956 83 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 Q8N7P7 452 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 IGKV3OR2-268A0A0C4DH90 116 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 A0A1W2PPM0 123 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 K7EP34 96 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 ZNF562Q6V9R5 426 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 BRD3OSQ6XYD6 125 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 PTPRSQ13332 1948 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 ATG2AQ2TAZ0 1938 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 H3BRN7 92 aa10.99□□□□□ -0.65
COL6A1-201ENST00000361866 USP9YO00507 2555 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms