RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 IGLC1P0CG04 106 aa10.21□□□□□ -0.77
SQSTM1-201ENST00000360718 KLK9Q2XQG4 91 aa10.21□□□□□ -0.77
SQSTM1-201ENST00000360718 C15orf32Q32M92 178 aa10.21□□□□□ -0.77
SQSTM1-201ENST00000360718 PGLYRP4Q96LB8 373 aa10.21□□□□□ -0.77
SQSTM1-201ENST00000360718 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.77
SQSTM1-201ENST00000360718 KLK9Q9UKQ9 250 aa10.21□□□□□ -0.77
SQSTM1-201ENST00000360718 TRAV9-2A0A087WT02 112 aa10.21□□□□□ -0.78
SQSTM1-201ENST00000360718 C19orf54Q5BKX5 351 aa10.21□□□□□ -0.78
SQSTM1-201ENST00000360718 LEMD1Q68G75 181 aa10.21□□□□□ -0.78
SQSTM1-201ENST00000360718 S100A7AQ86SG5 101 aa10.21□□□□□ -0.78
SQSTM1-201ENST00000360718 TMEM86BQ8N661 226 aa10.21□□□□□ -0.78
SQSTM1-201ENST00000360718 GSX1Q9H4S2 264 aaPredicted RBP10.21□□□□□ -0.78
SQSTM1-201ENST00000360718 S4R3C0 116 aa10.21□□□□□ -0.78
SQSTM1-201ENST00000360718 K7EQM0 130 aa10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 CHEK1O14757 476 aa10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 LY6G6DO95868 133 aa10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 LINC00322Q6ZN03 302 aaPredicted RBP10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 TMEM160Q9NX00 188 aa10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 ZNF580Q9UK33 172 aa10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 MRPS16Q9Y3D3 137 aaKnown RBP10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 HIVEP2P31629 2446 aa10.2□□□□□ -0.78
SQSTM1-201ENST00000360718 FAM223BA6NKX1 122 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 NPIPB6E9PJ23 425 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 H3BUA1 57 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 TMEM95Q3KNT9 176 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 DMRTA1Q5VZB9 504 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 EBLN2Q6P2I7 272 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 Q86TA4 180 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 BPIFA4PQ86YQ2 179 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 FAM223AQ8IWN6 122 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 OR4F17Q8NGA8 305 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 GTSF1Q8WW33 167 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 EEF1AKMT3Q96AZ1 226 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 NDFIP1Q9BT67 221 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 TMEM70Q9BUB7 260 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 LAMTOR2Q9Y2Q5 125 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 H3BTX0 84 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 TRGV3P03979 118 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 FCGR2BP31994 310 aaPredicted RBP10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 ATP5G2Q06055 141 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 LYPD1Q8N2G4 141 aa10.19□□□□□ -0.78
SQSTM1-201ENST00000360718 C2orf70A6NJV1 201 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 HAX1O00165 279 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 IGKV1-17P01599 117 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 IGHV3-23P01764 117 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 LCN12Q6JVE5 192 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 PRNTQ86SH4 94 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 TRBV7-1A0A0A6YYK4 115 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 BRI3O95415 125 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 OR5AL1P0C617 328 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 PPIFP30405 207 aaKnown RBP10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 FOXA3P55318 350 aaPredicted RBP10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 GOLT1AQ6ZVE7 132 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 ATOH7Q8N100 152 aa10.18□□□□□ -0.78
SQSTM1-201ENST00000360718 NSD1Q96L73 2696 aaPredicted RBP10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 OR2T8A6NH00 312 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 CYSRT1A8MQ03 144 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 PF4V1P10720 104 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 Q71RC1 249 aaPredicted RBP10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 TMEM75Q8N9X5 138 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 ZNF502Q8TBZ5 544 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 SHANK2-AS3Q9BTD1 123 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 LOC102724200A0A096LPH7 203 aaPredicted RBP10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 TSPOP30536 169 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 RIGQ13278 110 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 USMG5Q96IX5 58 aa10.17□□□□□ -0.78
SQSTM1-201ENST00000360718 TRBV19A0A075B6N1 114 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 A0A1B0GW15 77 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 F8W735 103 aaPredicted RBP10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 CRXO43186 299 aaPredicted RBP10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 LEPROTL1O95214 131 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 SRD5A1P18405 259 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 GPR183P32249 361 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 EXOC3-AS1Q8N2X6 119 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 URB1-AS1Q96HZ7 61 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 ATP6V0BQ99437 205 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 ESM1Q9NQ30 184 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 H3BRN7 92 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 IGLV2-11P01706 119 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 PCP4P48539 62 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 C16orf54Q6UWD8 224 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 ORAOV1Q8WV07 137 aa10.16□□□□□ -0.78
SQSTM1-201ENST00000360718 TRAV8-1A0A0A6YYK1 113 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 A0A0G2JLM5 398 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 A0A1B0GUT8 65 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 DNAJC9-AS1A6NH13 148 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 IGLV1-40P01703 118 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 CLEC3BP05452 202 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 CTSGP08311 255 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 CLEC19AQ6UXS0 136 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 ZNF702PQ9H963 129 aa10.15□□□□□ -0.78
SQSTM1-201ENST00000360718 IGHV1-24A0A0C4DH33 117 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 IL4P05112 153 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 IGLL1P15814 213 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 TFPI2P48307 235 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 CFHR3Q02985 330 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 Q6AWC8 147 aa10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 ZNF418Q8TF45 676 aaPredicted RBP10.14□□□□□ -0.79
SQSTM1-201ENST00000360718 RNF125Q96EQ8 232 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms