RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NTF3P20783 257 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 NDPQ00604 133 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 PSG3Q16557 428 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 EBLN2Q6P2I7 272 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 VMO1Q7Z5L0 202 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 ARPC1AQ92747 370 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 NDFIP1Q9BT67 221 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 SIRPDQ9H106 197 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 A0A1W2PPR1 153 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 FCGR2BP31994 310 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-202ENST00000360642 PDE6HQ13956 83 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 HES1Q14469 280 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 MINOS1Q5TGZ0 78 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 MINOS1-NBL1R4GNA1 71 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 GNG7O60262 68 aa5.65□□□□□ -1.5
CLCN3-202ENST00000360642 CRIP1P50238 77 aa5.65□□□□□ -1.5
CLCN3-202ENST00000360642 SPATA45Q537H7 98 aa5.65□□□□□ -1.5
CLCN3-202ENST00000360642 FAM120AOSQ5T036 256 aa5.65□□□□□ -1.5
CLCN3-202ENST00000360642 GATD1Q8NB37 220 aa5.65□□□□□ -1.5
CLCN3-202ENST00000360642 PSG8Q9UQ74 426 aa5.65□□□□□ -1.5
CLCN3-202ENST00000360642 CSMD2Q7Z408 3487 aa5.65□□□□□ -1.5
CLCN3-202ENST00000360642 LOC102724200A0A096LPH7 203 aaPredicted RBP5.65□□□□□ -1.51
CLCN3-202ENST00000360642 M0R2Z0 102 aa5.65□□□□□ -1.51
CLCN3-202ENST00000360642 FAM162BQ5T6X4 162 aa5.65□□□□□ -1.51
CLCN3-202ENST00000360642 RNASEKQ6P5S7 137 aaKnown RBP5.65□□□□□ -1.51
CLCN3-202ENST00000360642 CHCHD1Q96BP2 118 aaKnown RBP5.65□□□□□ -1.51
CLCN3-202ENST00000360642 TCAPO15273 167 aa5.65□□□□□ -1.51
CLCN3-202ENST00000360642 CRXO43186 299 aaPredicted RBP5.65□□□□□ -1.51
CLCN3-202ENST00000360642 SCGB2A1O75556 95 aa5.65□□□□□ -1.51
CLCN3-202ENST00000360642 IGLC3P0DOY3 106 aa5.65□□□□□ -1.51
CLCN3-202ENST00000360642 PMCHL1Q16048 86 aa5.65□□□□□ -1.51
CLCN3-202ENST00000360642 PIEZO1Q92508 2521 aa5.65□□□□□ -1.51
CLCN3-202ENST00000360642 NCBP2LA6PVI3 153 aaKnown RBP5.64□□□□□ -1.51
CLCN3-202ENST00000360642 K7EQM0 130 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 CSN3P07498 182 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 KLK9Q2XQG4 91 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 LCN12Q6JVE5 192 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 S100A7AQ86SG5 101 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 C21orf62Q9NYP8 219 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 KLK9Q9UKQ9 250 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 IGHV7-81A0A0B4J1V7 117 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 M0R3E3 92 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 CTSGP08311 255 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 COX8CQ7Z4L0 72 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 SPATA12Q7Z6I5 190 aa5.64□□□□□ -1.51
CLCN3-202ENST00000360642 A0A1B0GUT8 65 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 Q8N9W7 124 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 C1RLQ9NZP8 487 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 THYN1Q9P016 225 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 UQCR10Q9UDW1 63 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 IGHV1-24A0A0C4DH33 117 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 SERTM2A0A1B0GWG4 89 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 CHEK1O14757 476 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 LINC00614P0C842 121 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 Q56UQ5 140 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 TXN2Q99757 166 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.63□□□□□ -1.51
CLCN3-202ENST00000360642 ARMS2P0C7Q2 107 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 PSG9Q00887 426 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 SMAD5-AS1Q9Y6J3 95 aa5.63□□□□□ -1.51
CLCN3-202ENST00000360642 TRAV9-2A0A087WT02 112 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 IGHV2-70DA0A0C4DH43 119 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 A0A1B0GW15 77 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 C20orf202A1L168 122 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 OR2T8A6NH00 312 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 IGHG4P01861 327 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 UBE2E1P51965 193 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 NHLH1Q02575 133 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 Q6AWC8 147 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 CYB5R2Q6BCY4 276 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 ATOH7Q8N100 152 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 CLEC5AQ9NY25 188 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 IGHV3OR16-8A0A075B7F1 116 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 A0A0U1RRA0 63 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 IGHV3-23P01764 117 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 FAM106CPP0CH98 169 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 RPL7P18124 248 aaKnown RBP5.62□□□□□ -1.51
CLCN3-202ENST00000360642 RIGQ13278 110 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 ZNF493Q6ZR52 646 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 TMEM70Q9BUB7 260 aa5.62□□□□□ -1.51
CLCN3-202ENST00000360642 SYS1-DBNDD2H3BUS1 97 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 OR5AL1P0C617 328 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 IGLL1P15814 213 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 CSN1S1P47710 185 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 EFNA4P52798 201 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 LINC00173Q6ZV60 143 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 ZNF575Q86XF7 245 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 RABAC1Q9UI14 185 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 FBLL1A6NHQ2 334 aaKnown RBP5.61□□□□□ -1.51
CLCN3-202ENST00000360642 LEPROTL1O95214 131 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 ZNF138P52744 262 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 LMO4P61968 165 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 FOXE3Q13461 319 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 ZNF502Q8TBZ5 544 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 DPF1Q92782 380 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 LPAR2Q9HBW0 351 aa5.61□□□□□ -1.51
CLCN3-202ENST00000360642 IGHV3-35A0A0C4DH35 117 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 SH2D1AO60880 128 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 CT45A10P0DMU9 189 aa5.6□□□□□ -1.51
CLCN3-202ENST00000360642 TSPOP30536 169 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms