RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LINC00477Q96M19 166 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
SCAF1-201ENST00000360565 OVOL3O00110 214 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 P0C879 139 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 A0A1W2PRX2 142 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 CIRBPQ14011 172 aaKnown RBP12.97□□□□□ -0.33
SCAF1-201ENST00000360565 C11orf44Q8N8P7 122 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 C8orf31Q8N9H6 132 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 ZNF418Q8TF45 676 aaPredicted RBP12.97□□□□□ -0.33
SCAF1-201ENST00000360565 NUP210LQ5VU65 1888 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 IGLL1P15814 213 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 MEIG1Q5JSS6 88 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 VCX2Q9H322 139 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 SMPXQ9UHP9 88 aa12.97□□□□□ -0.33
SCAF1-201ENST00000360565 DUSP14O95147 198 aaKnown RBP12.96□□□□□ -0.33
SCAF1-201ENST00000360565 BCL6BQ8N143 479 aaPredicted RBP12.96□□□□□ -0.33
SCAF1-201ENST00000360565 MRPS16Q9Y3D3 137 aaKnown RBP12.96□□□□□ -0.33
SCAF1-201ENST00000360565 PRRC2CQ9Y520 2896 aaKnown RBP12.96□□□□□ -0.34
SCAF1-201ENST00000360565 TRAV12-3A0A0B4J271 114 aa12.96□□□□□ -0.34
SCAF1-201ENST00000360565 E7EUB6 86 aa12.96□□□□□ -0.34
SCAF1-201ENST00000360565 TNFRSF6BO95407 300 aa12.96□□□□□ -0.34
SCAF1-201ENST00000360565 ZNF815PA8K554 130 aa12.95□□□□□ -0.34
SCAF1-201ENST00000360565 UTF1Q5T230 341 aa12.95□□□□□ -0.34
SCAF1-201ENST00000360565 MRPL52Q86TS9 123 aaKnown RBP12.95□□□□□ -0.34
SCAF1-201ENST00000360565 IGHV1-24A0A0C4DH33 117 aa12.95□□□□□ -0.34
SCAF1-201ENST00000360565 USMG5Q96IX5 58 aa12.95□□□□□ -0.34
SCAF1-201ENST00000360565 NCKAP5O14513 1909 aa12.95□□□□□ -0.34
SCAF1-201ENST00000360565 DPH3P1Q9H4G8 78 aa12.95□□□□□ -0.34
SCAF1-201ENST00000360565 UNQ6494/PRO21346Q6UXR6 183 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 IL17RELQ6ZVW7 336 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 PRO3102Q9H379 93 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 TEX43Q6ZNM6 134 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 FAM167A-AS1Q96KT0 104 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 IGHV2-70DA0A0C4DH43 119 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 PRSS46E5RG02 174 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 IGF2-ASQ6U949 168 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 PRSS57Q6UWY2 283 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 NBL1P41271 181 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 CR1LQ2VPA4 569 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 LINC01559Q495D7 138 aa12.94□□□□□ -0.34
SCAF1-201ENST00000360565 FAM223BA6NKX1 122 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 TCF15Q12870 199 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 FAM223AQ8IWN6 122 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 LTAP01374 205 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 MRPL51Q4U2R6 128 aaKnown RBP12.93□□□□□ -0.34
SCAF1-201ENST00000360565 VGLL1Q99990 258 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 MRPL36Q9P0J6 103 aaKnown RBP12.93□□□□□ -0.34
SCAF1-201ENST00000360565 PEMTQ9UBM1 199 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 NAV3Q8IVL0 2385 aa12.93□□□□□ -0.34
SCAF1-201ENST00000360565 TMEM8BA6NDV4 472 aa12.92□□□□□ -0.34
SCAF1-201ENST00000360565 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
SCAF1-201ENST00000360565 UBE2V1Q13404 147 aa12.92□□□□□ -0.34
SCAF1-201ENST00000360565 NAV2Q8IVL1 2488 aa12.92□□□□□ -0.34
SCAF1-201ENST00000360565 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
SCAF1-201ENST00000360565 ZNF479Q96JC4 524 aa12.92□□□□□ -0.34
SCAF1-201ENST00000360565 SAMD5Q5TGI4 173 aa12.92□□□□□ -0.34
SCAF1-201ENST00000360565 DAZ1Q9NQZ3 744 aaKnown RBP12.92□□□□□ -0.34
SCAF1-201ENST00000360565 MAJINQ3KP22 176 aa12.91□□□□□ -0.34
SCAF1-201ENST00000360565 CGB3P0DN86 165 aa12.91□□□□□ -0.34
SCAF1-201ENST00000360565 CGB7P0DN87 165 aa12.91□□□□□ -0.34
SCAF1-201ENST00000360565 TDRG1Q3Y452 100 aa12.91□□□□□ -0.34
SCAF1-201ENST00000360565 ANKRD11Q6UB99 2663 aaPredicted RBP12.91□□□□□ -0.34
SCAF1-201ENST00000360565 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
SCAF1-201ENST00000360565 IGHV1-69DA0A0B4J2H0 117 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 IGHV1-69P01742 117 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 PIP4P2Q8N4L2 257 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 CSTL1Q9H114 145 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 COX11Q9Y6N1 276 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 SIGLEC8Q9NYZ4 499 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 IGHV3-64A0A075B6Q5 118 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 A0A087WWL8 130 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 K7EIM0 57 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 GP9P14770 177 aa12.9□□□□□ -0.34
SCAF1-201ENST00000360565 IGKV3D-20A0A0C4DH25 116 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 FAM120AOSQ5T036 256 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 ZNF876PQ49A33 203 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 C22orf34Q6ZV56 151 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 KIR3DS1Q14943 382 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 SORL1Q92673 2214 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 TRGV11A0A075B6L2 103 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 NPYP01303 97 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 MSMBP08118 114 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 DSCR9P59020 149 aa12.89□□□□□ -0.35
SCAF1-201ENST00000360565 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
SCAF1-201ENST00000360565 IGHV3-73A0A0B4J1V6 119 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 I3L2K1 104 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 CD5LO43866 347 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 OR5A1Q8NGJ0 315 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 HCFC1P51610 2035 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 HOXA3O43365 443 aaPredicted RBP12.88□□□□□ -0.35
SCAF1-201ENST00000360565 NPSP0C0P6 89 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 EMP1P54849 157 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 MAPK1IP1LQ8NDC0 245 aa12.88□□□□□ -0.35
SCAF1-201ENST00000360565 TRGV2A0A075B6R0 118 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms