RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TAL2Q16559 108 aa14.68□□□□□ -0.06
SHANK1-202ENST00000359082 TPSG1Q9NRR2 321 aa14.68□□□□□ -0.06
SHANK1-202ENST00000359082 H3BRN7 92 aa14.68□□□□□ -0.06
SHANK1-202ENST00000359082 FGF6P10767 208 aa14.68□□□□□ -0.06
SHANK1-202ENST00000359082 NDUFS5O43920 106 aa14.68□□□□□ -0.06
SHANK1-202ENST00000359082 INAFM2P0DMQ5 153 aa14.67□□□□□ -0.06
SHANK1-202ENST00000359082 UBL5Q9BZL1 73 aa14.67□□□□□ -0.06
SHANK1-202ENST00000359082 NDUFA4O00483 81 aa14.66□□□□□ -0.06
SHANK1-202ENST00000359082 ABCA7Q8IZY2 2146 aa14.66□□□□□ -0.06
SHANK1-202ENST00000359082 ALPK2Q86TB3 2170 aa14.66□□□□□ -0.06
SHANK1-202ENST00000359082 ESPL1Q14674 2120 aa14.66□□□□□ -0.06
SHANK1-202ENST00000359082 ANGP03950 147 aaKnown RBP14.66□□□□□ -0.06
SHANK1-202ENST00000359082 C9orf118A6NHY6 69 aa14.66□□□□□ -0.06
SHANK1-202ENST00000359082 CR1LQ2VPA4 569 aa14.66□□□□□ -0.06
SHANK1-202ENST00000359082 NDUFA12Q9UI09 145 aa14.66□□□□□ -0.06
SHANK1-202ENST00000359082 Q8TCH9 128 aa14.65□□□□□ -0.06
SHANK1-202ENST00000359082 C9JQL5 133 aa14.65□□□□□ -0.06
SHANK1-202ENST00000359082 TINCRA0A1B0GVN0 87 aa14.65□□□□□ -0.06
SHANK1-202ENST00000359082 SLAQ13239 276 aa14.65□□□□□ -0.06
SHANK1-202ENST00000359082 TSSC4Q9Y5U2 329 aaPredicted RBP14.65□□□□□ -0.06
SHANK1-202ENST00000359082 hADV29S1A0JD25 119 aa14.65□□□□□ -0.06
SHANK1-202ENST00000359082 DEFB105AQ8NG35 78 aa14.65□□□□□ -0.06
SHANK1-202ENST00000359082 C22orf46C9J442 243 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 SMIM27A0A1W2PRY6 76 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 ZNF134P52741 427 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 ARHGEF17Q96PE2 2063 aaPredicted RBP14.64□□□□□ -0.07
SHANK1-202ENST00000359082 WIPF3A6NGB9 483 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 CEND1Q8N111 149 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 ZNF726P1Q15940 193 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 E9PQ18 207 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 K7ENP7 123 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 ZC2HC1AQ96GY0 325 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 PRR25Q96S07 402 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 APC2O95996 2303 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 DOCK6Q96HP0 2047 aa14.64□□□□□ -0.07
SHANK1-202ENST00000359082 Q6ZR03 302 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 RMI2Q96E14 147 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 OR11H6Q8NGC7 330 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 IGHG4P01861 327 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 SIGLEC8Q9NYZ4 499 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 A0A0J9YY99 117 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 WDR86Q86TI4 376 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 COL4A6Q14031 1691 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 FAM186AA6NE01 2351 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 DIAPH2-AS1Q14236 149 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 CT83Q5H943 113 aa14.63□□□□□ -0.07
SHANK1-202ENST00000359082 TRBV20-1A0A075B6N2 111 aa14.62□□□□□ -0.07
SHANK1-202ENST00000359082 K7ERJ3 54 aa14.62□□□□□ -0.07
SHANK1-202ENST00000359082 V9GYV3 84 aa14.62□□□□□ -0.07
SHANK1-202ENST00000359082 NPSP0C0P6 89 aa14.62□□□□□ -0.07
SHANK1-202ENST00000359082 CARD19Q96LW7 228 aa14.62□□□□□ -0.07
SHANK1-202ENST00000359082 CACNA1DQ01668 2161 aa14.62□□□□□ -0.07
SHANK1-202ENST00000359082 NPYP01303 97 aa14.61□□□□□ -0.07
SHANK1-202ENST00000359082 IGKV1OR2-108A0A075B7D4 117 aa14.61□□□□□ -0.07
SHANK1-202ENST00000359082 FHL1Q13642 323 aa14.61□□□□□ -0.07
SHANK1-202ENST00000359082 UTF1Q5T230 341 aa14.61□□□□□ -0.07
SHANK1-202ENST00000359082 MPDZO75970 2070 aa14.61□□□□□ -0.07
SHANK1-202ENST00000359082 LOXP28300 417 aaPredicted RBP14.61□□□□□ -0.07
SHANK1-202ENST00000359082 PRB1P04280 392 aa14.61□□□□□ -0.07
SHANK1-202ENST00000359082 PPDPFLQ8WWR9 84 aa14.61□□□□□ -0.07
SHANK1-202ENST00000359082 MRPL35Q9NZE8 188 aaKnown RBP14.6□□□□□ -0.07
SHANK1-202ENST00000359082 Q6ZQT7 251 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 IGKV2D-24A0A075B6R9 120 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 CRYGCP07315 174 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 Q6ZWC4 215 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 TRAV13-2A0A0B4J235 113 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 IGHV7-4-1A0A0J9YVY3 117 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 IGHV2-70P01814 119 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 HERVK_113P63121 156 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 ZSWIM8A7E2V4 1837 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 LMO1P25800 156 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 XCL1P47992 114 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 NOP10Q9NPE3 64 aaKnown RBP14.6□□□□□ -0.07
SHANK1-202ENST00000359082 THSD7BQ9C0I4 1608 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 TRACP01848 142 aa14.6□□□□□ -0.07
SHANK1-202ENST00000359082 ZNF503-AS2A6NEH8 195 aa14.59□□□□□ -0.07
SHANK1-202ENST00000359082 F8W1H4 67 aa14.59□□□□□ -0.07
SHANK1-202ENST00000359082 IGLC2P0DOY2 106 aa14.59□□□□□ -0.07
SHANK1-202ENST00000359082 IGLC3P0DOY3 106 aa14.59□□□□□ -0.07
SHANK1-202ENST00000359082 UBE2BP63146 152 aa14.59□□□□□ -0.07
SHANK1-202ENST00000359082 TMEM14CQ9P0S9 112 aa14.59□□□□□ -0.07
SHANK1-202ENST00000359082 IFITM1P13164 125 aa14.59□□□□□ -0.07
SHANK1-202ENST00000359082 TP53BP1Q12888 1972 aaPredicted RBP14.59□□□□□ -0.07
SHANK1-202ENST00000359082 ANK1P16157 1881 aa14.58□□□□□ -0.07
SHANK1-202ENST00000359082 K7EP13 123 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 RS1O15537 224 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 VOPP1Q96AW1 172 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 SMIM2Q9BVW6 85 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 COX8AP10176 69 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 ZMAT4Q9H898 229 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 IGHV4-4A0A075B6R2 117 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 K7EP34 96 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 PRO1854Q9UHT4 67 aa14.58□□□□□ -0.08
SHANK1-202ENST00000359082 WT1-ASQ06250 92 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 LGALS9BQ3B8N2 356 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 LGALS9CQ6DKI2 356 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 TRIOBPQ9H2D6 2365 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 IGLV2-23P01705 113 aa14.57□□□□□ -0.08
SHANK1-202ENST00000359082 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.57□□□□□ -0.08
SHANK1-202ENST00000359082 IGKV2-29A2NJV5 120 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms