RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 BEX4Q9NWD9 120 aaPredicted RBP11.46□□□□□ -0.58
GABPB1-202ENST00000359031 CLEC5AQ9NY25 188 aa11.46□□□□□ -0.58
GABPB1-202ENST00000359031 TMEM189A5PLL7 270 aa11.45□□□□□ -0.58
GABPB1-202ENST00000359031 BMI1P35226 326 aa11.45□□□□□ -0.58
GABPB1-202ENST00000359031 SRSF2Q01130 221 aaKnown RBP11.45□□□□□ -0.58
GABPB1-202ENST00000359031 VGLL1Q99990 258 aa11.45□□□□□ -0.58
GABPB1-202ENST00000359031 LOC102724200A0A096LPH7 203 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-202ENST00000359031 IGHV3-66A0A0C4DH42 116 aa11.44□□□□□ -0.58
GABPB1-202ENST00000359031 A0A0G2JLM5 398 aa11.44□□□□□ -0.58
GABPB1-202ENST00000359031 IGLV1-40P01703 118 aa11.44□□□□□ -0.58
GABPB1-202ENST00000359031 PMCHP20382 165 aa11.44□□□□□ -0.58
GABPB1-202ENST00000359031 BLCAPP62952 87 aa11.44□□□□□ -0.58
GABPB1-202ENST00000359031 CFHR3Q02985 330 aa11.44□□□□□ -0.58
GABPB1-202ENST00000359031 IGFL4Q6B9Z1 124 aa11.44□□□□□ -0.58
GABPB1-202ENST00000359031 ZNF705FA8MVS1 300 aaPredicted RBP11.43□□□□□ -0.58
GABPB1-202ENST00000359031 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
GABPB1-202ENST00000359031 PRB4P10163 310 aaPredicted RBP11.43□□□□□ -0.58
GABPB1-202ENST00000359031 DDTP30046 118 aa11.43□□□□□ -0.58
GABPB1-202ENST00000359031 C8orf86Q6ZUL3 223 aa11.43□□□□□ -0.58
GABPB1-202ENST00000359031 LRRC75A-AS1Q8N1F1 130 aa11.43□□□□□ -0.58
GABPB1-202ENST00000359031 ZNF664Q8N3J9 261 aa11.43□□□□□ -0.58
GABPB1-202ENST00000359031 Q8TAT8 98 aa11.43□□□□□ -0.58
GABPB1-202ENST00000359031 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
GABPB1-202ENST00000359031 PRO1933Q9H354 126 aa11.43□□□□□ -0.58
GABPB1-202ENST00000359031 ARMS2P0C7Q2 107 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 PF4V1P10720 104 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 FAM209BQ5JX69 171 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 DMRTA1Q5VZB9 504 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 C9orf139Q6ZV77 190 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 NRN1Q9NPD7 142 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 HSBP1O75506 76 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 ZNF705DP0CH99 300 aaPredicted RBP11.42□□□□□ -0.58
GABPB1-202ENST00000359031 ZNF705BP0CI00 300 aaPredicted RBP11.42□□□□□ -0.58
GABPB1-202ENST00000359031 RNF182Q8N6D2 247 aa11.42□□□□□ -0.58
GABPB1-202ENST00000359031 SPG11Q96JI7 2443 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
GABPB1-202ENST00000359031 IGHV3OR16-13A0A075B7E8 117 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 IGHV3-49A0A0A0MS15 119 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 IGHV3-74A0A0B4J1X5 117 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 PRAC2D3DTV9 90 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 TGFAP01135 160 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 FSHBP01225 129 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 TRBV12-3P01733 135 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 FOSL1P15407 271 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 CTRLP40313 264 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 DEFA6Q01524 100 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 RNASEKQ6P5S7 137 aaKnown RBP11.41□□□□□ -0.58
GABPB1-202ENST00000359031 TEX43Q6ZNM6 134 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 OR4X2Q8NGF9 303 aa11.41□□□□□ -0.58
GABPB1-202ENST00000359031 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.4□□□□□ -0.587e-11■■■■■ 55.5
GABPB1-202ENST00000359031 KIR2DL5BA0A0G2JN68 375 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 KIR2DL5BA0A0G2JPC4 375 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 IGHV4-59P01825 116 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 DEFB113Q30KQ7 82 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 CYB5R2Q6BCY4 276 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 ZNF493Q6ZR52 646 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 Q6ZS46 218 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 NIT1Q86X76 327 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 KIR2DL5AQ8N109 375 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 CHCHD1Q96BP2 118 aaKnown RBP11.4□□□□□ -0.58
GABPB1-202ENST00000359031 KLK15Q9H2R5 256 aa11.4□□□□□ -0.58
GABPB1-202ENST00000359031 TMEM89A2RUT3 159 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 IGHV4-31P0DP07 118 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 NTF3P20783 257 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 ZNF80P51504 273 aaPredicted RBP11.39□□□□□ -0.59
GABPB1-202ENST00000359031 KRTDAPP60985 99 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 ERCC8Q13216 396 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 UNQ9165/PRO28630Q6UXU0 137 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 NPFFR1Q9GZQ6 430 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 FBN3Q75N90 2809 aa11.39□□□□□ -0.59
GABPB1-202ENST00000359031 FABP5P3A8MUU1 101 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 IGHV3-11P01762 117 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 ZNF138P52744 262 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 TMEM78Q5T7P6 136 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 REC114Q7Z4M0 266 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 TPPP3Q9BW30 176 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 RNF114Q9Y508 228 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 PRRC2AP48634 2157 aaKnown RBP11.38□□□□□ -0.59
GABPB1-202ENST00000359031 CR1P17927 2039 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 TMSB15BA0A087X1C1 80 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 M0R2Z0 102 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 IGLC6P0CF74 106 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 CD33P20138 364 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 RAB4AP20338 218 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
GABPB1-202ENST00000359031 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 Q5PR19 223 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 FAM19A2Q8N3H0 131 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 FER1L6-AS1Q8NA97 138 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 SMR3AQ99954 134 aa11.38□□□□□ -0.59
GABPB1-202ENST00000359031 DNHD1Q96M86 4753 aa11.37□□□□□ -0.59
GABPB1-202ENST00000359031 SMAD7O15105 426 aaKnown RBP11.37□□□□□ -0.59
GABPB1-202ENST00000359031 IL17RELQ6ZVW7 336 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms