RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FHL1Q13642 323 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 ZNF114Q8NC26 417 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 SIGLEC8Q9NYZ4 499 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 CPAMD8Q8IZJ3 1885 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 F8VRH5 84 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 SOCS3O14543 225 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 RASL10AQ92737 203 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 RPUSD1Q9UJJ7 312 aaKnown RBP7.13□□□□□ -1.27
COL6A6-201ENST00000358511 WFDC12Q8WWY7 111 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 PAX9P55771 341 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 PAX8Q06710 450 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 DUSP14O95147 198 aaKnown RBP7.13□□□□□ -1.27
COL6A6-201ENST00000358511 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
COL6A6-201ENST00000358511 SRRM4A7MD48 611 aaKnown RBP7.13□□□□□ -1.27
COL6A6-201ENST00000358511 J3KT08 172 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 RNF144BQ7Z419 303 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 ANKRD29Q8N6D5 301 aa7.13□□□□□ -1.27
COL6A6-201ENST00000358511 A0A1W2PR77 199 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 ANKRD39Q53RE8 183 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 LY6G5BQ8NDX9 201 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 LINC00477Q96M19 166 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 ADARB2-AS1A8MUL3 147 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 ZNF474Q6S9Z5 364 aaPredicted RBP7.12□□□□□ -1.27
COL6A6-201ENST00000358511 PATE3B3GLJ2 98 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 RNASE2P10153 161 aaKnown RBP7.12□□□□□ -1.27
COL6A6-201ENST00000358511 HLA-DRB4P13762 266 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 AMTNQ6UX39 209 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 HLA-DRB4X5D2U9 266 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 ZCCHC24Q8N2G6 241 aaKnown RBP7.12□□□□□ -1.27
COL6A6-201ENST00000358511 SPXQ9BT56 116 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 SEC61GP60059 68 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 MRPL51Q4U2R6 128 aaKnown RBP7.12□□□□□ -1.27
COL6A6-201ENST00000358511 ZNF581Q9P0T4 197 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 FOXI2Q6ZQN5 318 aa7.12□□□□□ -1.27
COL6A6-201ENST00000358511 G3V4G9 280 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 PRB2P02812 416 aaPredicted RBP7.11□□□□□ -1.27
COL6A6-201ENST00000358511 SLC25A16P16260 332 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 C12orf74Q32Q52 190 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 SRSF8Q9BRL6 282 aaKnown RBP7.11□□□□□ -1.27
COL6A6-201ENST00000358511 TDRG1Q3Y452 100 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 GGNQ86UU5 652 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 DTX1Q86Y01 620 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 SHANK2-AS3Q9BTD1 123 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 KLRD1Q13241 179 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 SCRT2Q9NQ03 307 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 Q6ZVH6 145 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 THAP8Q8NA92 274 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 TP53TG1Q9Y2A0 90 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 TRBV7-1A0A0A6YYK4 115 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 TFF1P04155 84 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 PRB1P04280 392 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 ERCC8Q13216 396 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 TCTEX1D4Q5JR98 221 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 BDP1A6H8Y1 2624 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 C10orf55Q5SWW7 151 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 C15orf53Q8NAA6 179 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 CARD19Q96LW7 228 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 UBL5Q9BZL1 73 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 C9orf139Q6ZV77 190 aa7.11□□□□□ -1.27
COL6A6-201ENST00000358511 ACYP1P07311 99 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 PRIMA1Q86XR5 153 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 CD24P25063 80 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 RBM3P98179 157 aaKnown RBP7.1□□□□□ -1.27
COL6A6-201ENST00000358511 MORN5Q5VZ52 161 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 TMEM213A2RRL7 107 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 K7EN84 100 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 IGLV3-19P01714 112 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 SRD5A1P18405 259 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 RNF5Q99942 180 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 MRPL35Q9NZE8 188 aaKnown RBP7.1□□□□□ -1.27
COL6A6-201ENST00000358511 TIMM23O14925 209 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 IGKV1-6A0A0C4DH72 117 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 UCNP55089 124 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 ZNF876PQ49A33 203 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 C2orf66Q6UXQ4 117 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 TEN1Q86WV5 123 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 IGKV1-16P04430 117 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 PEMTQ9UBM1 199 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 C5orf63A6NC05 138 aa7.1□□□□□ -1.27
COL6A6-201ENST00000358511 PYGO2Q9BRQ0 406 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 PRADC1Q9BSG0 188 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 NPYP01303 97 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 IL15RAQ13261 267 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 C1orf147Q96MC9 270 aaPredicted RBP7.09□□□□□ -1.27
COL6A6-201ENST00000358511 SAP30O75446 220 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 CD177Q8N6Q3 437 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 K7EMI3 77 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 C4orf48Q5BLP8 95 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 CSRP2Q16527 193 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 C8orf49Q96NF6 230 aa7.09□□□□□ -1.27
COL6A6-201ENST00000358511 IGHV1-8P0DP01 117 aa7.09□□□□□ -1.28
COL6A6-201ENST00000358511 GPR179Q6PRD1 2367 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 NDUFS7O75251 213 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 IGLC1P0CG04 106 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 NEU4Q8WWR8 484 aaPredicted RBP7.08□□□□□ -1.28
COL6A6-201ENST00000358511 ACACBO00763 2458 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 IGHV1-3A0A0C4DH29 117 aa7.08□□□□□ -1.28
COL6A6-201ENST00000358511 TRPT1Q86TN4 253 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms