RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 ATP6V0BQ99437 205 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 TRAV25A0A0B4J276 109 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 IGLV1-51P01701 117 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 S100A6P06703 90 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 FHITP49789 147 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 FLI1Q01543 452 aaPredicted RBP2.84□□□□□ -1.95
SMC1B-201ENST00000357450 PPP1R1AQ13522 171 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 TMEM229BQ8NBD8 167 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 OR2T35Q8NGX2 323 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 GPR146Q96CH1 333 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 SH3BGRL3Q9H299 93 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 RBKSQ9H477 322 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 GSN-AS1Q9NRJ2 163 aa2.84□□□□□ -1.95
SMC1B-201ENST00000357450 RAB14P61106 215 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 RBMY1FQ15415 496 aaKnown RBP2.84□□□□□ -1.96
SMC1B-201ENST00000357450 BSXQ3C1V8 233 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 MORN3Q6PF18 240 aaPredicted RBP2.84□□□□□ -1.96
SMC1B-201ENST00000357450 TMEM182Q6ZP80 229 aaPredicted RBP2.84□□□□□ -1.96
SMC1B-201ENST00000357450 GPHB5Q86YW7 130 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 TMEM256Q8N2U0 113 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 C11orf42Q8N5U0 333 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 RNF182Q8N6D2 247 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 NPBQ8NG41 125 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 FRZBQ92765 325 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 HIST1H2BAQ96A08 127 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 PFDN5Q99471 154 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 AP5S1Q9NUS5 200 aa2.84□□□□□ -1.96
SMC1B-201ENST00000357450 TMEM218A2RU14 115 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 FAM24AA6NFZ4 105 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 PRSS29PA6NIE9 313 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 INMT-MINDY4F8WBC2 141 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 I3L521 148 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 IGLV2-8P01709 118 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 IGHV3-30P01768 117 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 IGHV3-33P01772 117 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 CSN3P07498 182 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 IGHV3-30-3P0DP02 117 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 IGHV3-30-5P0DP03 117 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 KLF5Q13887 457 aaPredicted RBP2.83□□□□□ -1.96
SMC1B-201ENST00000357450 ZNF56Q15929 161 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 LINC00305Q7Z4B0 112 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 ZNF546Q86UE3 836 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 RXFP4Q8TDU9 374 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 C8orf49Q96NF6 230 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 SLC25A21Q9BQT8 299 aaPredicted RBP2.83□□□□□ -1.96
SMC1B-201ENST00000357450 PRADC1Q9BSG0 188 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 SLC35B3Q9H1N7 401 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 IFT22Q9H7X7 185 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 MAP6D1Q9H9H5 199 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 NPVFQ9HCQ7 196 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 TEX48A0A1B0GUV7 120 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 C15orf62A8K5M9 175 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 GPX4P36969 197 aaPredicted RBP2.83□□□□□ -1.96
SMC1B-201ENST00000357450 RAB4BP61018 213 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 CYCSP99999 105 aaKnown RBP2.83□□□□□ -1.96
SMC1B-201ENST00000357450 WT1-ASQ06250 92 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 TMEM128Q5BJH2 165 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 SPANXN1Q5VSR9 72 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 MIC13Q5XKP0 118 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 RNASEKQ6P5S7 137 aaKnown RBP2.83□□□□□ -1.96
SMC1B-201ENST00000357450 LCN15Q6UWW0 184 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 TTC9CQ8N5M4 171 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 ZNF439Q8NDP4 499 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 TP53RKQ96S44 253 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 TREM1Q9NP99 234 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 FUT9Q9Y231 359 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 PHLDA3Q9Y5J5 127 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 APOBP04114 4563 aaKnown RBP2.83□□□□□ -1.96
SMC1B-201ENST00000357450 TRAV26-1A0A087WT03 109 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 TMEM189A5PLL7 270 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 FAM90A9PA6NNJ1 464 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 NPIPB5A8MRT5 1133 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 M0R381 172 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 CHEK1O14757 476 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 RBFOX2O43251 390 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMC1B-201ENST00000357450 OR4E1P0C645 316 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 RAB5CP51148 216 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 FFAR4Q5NUL3 377 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 GFI1BQ5VTD9 330 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 PRNTQ86SH4 94 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 BTF3L4Q96K17 158 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 PAXXQ9BUH6 204 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 DNAJC4Q9NNZ3 241 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 ZNF586Q9NXT0 402 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 MLXQ9UH92 298 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 DMRT1Q9Y5R6 373 aa2.83□□□□□ -1.96
SMC1B-201ENST00000357450 IGHV4-4A0A075B6R2 117 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 A0A0B4J2A0 478 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 SERTM2A0A1B0GWG4 89 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 PCP4P48539 62 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 ZNF90Q03938 601 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 TTC32Q5I0X7 151 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 Q6ZWC4 215 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 OR2K2Q8NGT1 345 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 SHPKQ9UHJ6 478 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 TMEM213A2RRL7 107 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 NPIPB6E9PJ23 425 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 LECT2O14960 151 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 MPDU1O75352 247 aa2.82□□□□□ -1.96
SMC1B-201ENST00000357450 CNN1P51911 297 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms