RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 FAM106AQ4KMX7 169 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 ANKRD39Q53RE8 183 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 ZC2HC1BQ5TFG8 222 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 FAM74A4Q5TZK3 123 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 ZNF562Q6V9R5 426 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 OR11H1Q8NG94 326 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 OR11H2Q8NH07 326 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 NXT2Q9NPJ8 142 aaKnown RBP5.38□□□□□ -1.55
RTN4-203ENST00000357376 MSRB1Q9NZV6 116 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 JKAMPQ9P055 326 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 G3V318 75 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 SMAD7O15105 426 aaKnown RBP5.38□□□□□ -1.55
RTN4-203ENST00000357376 IGLV1-47P01700 117 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 IGKCP01834 107 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 CRYGCP07315 174 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 EGR2P11161 476 aaPredicted RBP5.38□□□□□ -1.55
RTN4-203ENST00000357376 PDE6HQ13956 83 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 IL17RELQ6ZVW7 336 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 SPATA12Q7Z6I5 190 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 OR4X2Q8NGF9 303 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 MLST8Q9BVC4 326 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 DKK2Q9UBU2 259 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 MGAQ8IWI9 3026 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 TRAV26-2A0A0B4J265 109 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 INS-IGF2F8WCM5 200 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 DPM2O94777 84 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 PPBPP02775 128 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 LOXL1Q08397 574 aaPredicted RBP5.38□□□□□ -1.55
RTN4-203ENST00000357376 OCIAD2Q56VL3 154 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 Q71RC1 249 aaPredicted RBP5.38□□□□□ -1.55
RTN4-203ENST00000357376 NEU4Q8WWR8 484 aaPredicted RBP5.38□□□□□ -1.55
RTN4-203ENST00000357376 SCGB3A1Q96QR1 104 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 ATP5LO75964 103 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 GATA1P15976 413 aaPredicted RBP5.38□□□□□ -1.55
RTN4-203ENST00000357376 SRD5A1P18405 259 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 PRTN3P24158 256 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 Q1RN00 199 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 C8orf31Q8N9H6 132 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 OR9G4Q8NGQ1 327 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 PRSS22Q9GZN4 317 aa5.38□□□□□ -1.55
RTN4-203ENST00000357376 TNRC6BQ9UPQ9 1833 aaKnown RBP5.37□□□□□ -1.55
RTN4-203ENST00000357376 NCOR2Q9Y618 2525 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 IGHV2-70DA0A0C4DH43 119 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
RTN4-203ENST00000357376 PCP2Q8IVA1 136 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 TTC9CQ8N5M4 171 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 SLC50A1Q9BRV3 221 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 DOPEY2Q9Y3R5 2298 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 CACNA1AO00555 2505 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 SPRY2O43597 315 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 NDUFS7O75251 213 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 RNASE4P34096 147 aaKnown RBP5.37□□□□□ -1.55
RTN4-203ENST00000357376 SAMD5Q5TGI4 173 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 DEFB125Q8N687 156 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 ARL6IP6Q8N6S5 226 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 TTTY13Q9BZ97 58 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 RAXQ9Y2V3 346 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 ATP6V0E1O15342 81 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 SCRT2Q9NQ03 307 aa5.37□□□□□ -1.55
RTN4-203ENST00000357376 BOD1L1Q8NFC6 3051 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 CSPG4Q6UVK1 2322 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 FAM208BQ5VWN6 2430 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 TRAV40A0A0B4J280 105 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 H7C2G1 150 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 TAX1BP3O14907 124 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 MYCNOSP40205 109 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 BRD3OSQ6XYD6 125 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 LCNL1Q6ZST4 164 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 SAA4P35542 130 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 LINC01545Q5VT33 79 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 DYNAPQ8N1N2 210 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 SRSF8Q9BRL6 282 aaKnown RBP5.36□□□□□ -1.55
RTN4-203ENST00000357376 M0R1W7 72 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 TGFAP01135 160 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 ASIPP42127 132 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 KLRB1Q12918 225 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 JMJD8Q96S16 334 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 ACACBO00763 2458 aa5.36□□□□□ -1.55
RTN4-203ENST00000357376 TMEM8BA6NDV4 472 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 K7EMI3 77 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 HERVK_113P61574 105 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 LGALS9BQ3B8N2 356 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 LGALS9CQ6DKI2 356 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 MTURNQ8N3F0 131 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 OR1N2Q8NGR9 330 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 K7ERJ3 54 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 APOMO95445 188 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 PAX8Q06710 450 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 LAGE3Q14657 143 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 TMEM170BQ5T4T1 132 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 C14orf178Q8N769 122 aaPredicted RBP5.35□□□□□ -1.55
RTN4-203ENST00000357376 CHAC1Q9BUX1 264 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 WDFY3Q8IZQ1 3526 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 PSMB2P49721 201 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 EMP1P54849 157 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.556e-8■■□□□ 14
RTN4-203ENST00000357376 DTX2Q86UW9 622 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 URB1-AS1Q96HZ7 61 aa5.35□□□□□ -1.55
RTN4-203ENST00000357376 MRPL16Q9NX20 251 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms