RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 THAP8Q8NA92 274 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 A8MWP6 167 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 LGALS1P09382 135 aaKnown RBP9.43□□□□□ -0.9
COL9A1-202ENST00000357250 PHLDA1Q8WV24 401 aaPredicted RBP9.43□□□□□ -0.9
COL9A1-202ENST00000357250 IGHV1-69DA0A0B4J2H0 117 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 IGHV1-69P01742 117 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 LHFPL4Q7Z7J7 247 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 WDR86Q86TI4 376 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 Q8N8P6 123 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 CYYR1Q96J86 154 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 HTTP42858 3142 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 LTBP2Q14767 1821 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 IGHV2-70DA0A0C4DH43 119 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 OVOL3O00110 214 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 NDUFA4O00483 81 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 JPT2Q9H910 190 aa9.43□□□□□ -0.9
COL9A1-202ENST00000357250 PRRC2CQ9Y520 2896 aaKnown RBP9.42□□□□□ -0.9
COL9A1-202ENST00000357250 J3QLI3 93 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 TIMM21Q9BVV7 248 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 LAMA2P24043 3122 aaKnown RBP9.42□□□□□ -0.9
COL9A1-202ENST00000357250 H3BRN7 92 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 C1orf122Q6ZSJ8 110 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 SPANXA1Q9NS26 97 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 SPTBN4Q9H254 2564 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 K7EM74 188 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 ATP6V0E1O15342 81 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 GAGE2BQ13066 116 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 GAGE2EQ4V326 116 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 RNF138Q8WVD3 245 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 GAGE2DQ9UEU5 116 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 ADAMTS9Q9P2N4 1935 aa9.42□□□□□ -0.9
COL9A1-202ENST00000357250 KIR3DS1Q14943 382 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 KLHL30-AS1Q8NEE0 82 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 OBSL1O75147 1896 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 DNAJC30Q96LL9 226 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 ANAPC13Q9BS18 74 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 SMIM27A0A1W2PRY6 76 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 LEPROTO15243 131 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 LINC00479Q96M42 142 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 A0A087X0K7 114 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 H3BUA1 57 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 ESDP10768 282 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 ZNF726P1Q15940 193 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 NSUN5P1Q3KNT7 163 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 DMRTC2Q8IXT2 367 aaPredicted RBP9.41□□□□□ -0.9
COL9A1-202ENST00000357250 V9GYV3 84 aa9.41□□□□□ -0.9
COL9A1-202ENST00000357250 PAX4O43316 350 aa9.4□□□□□ -0.9
COL9A1-202ENST00000357250 LCNL1Q6ZST4 164 aa9.4□□□□□ -0.9
COL9A1-202ENST00000357250 CHD8Q9HCK8 2581 aa9.4□□□□□ -0.9
COL9A1-202ENST00000357250 Q6ZSR3 168 aa9.4□□□□□ -0.9
COL9A1-202ENST00000357250 PRR25Q96S07 402 aa9.4□□□□□ -0.9
COL9A1-202ENST00000357250 C11orf68Q9H3H3 251 aaKnown RBP9.4□□□□□ -0.9
COL9A1-202ENST00000357250 TDGF1P3P51864 188 aa9.4□□□□□ -0.9
COL9A1-202ENST00000357250 LURAP1LQ8IV03 231 aa9.4□□□□□ -0.9
COL9A1-202ENST00000357250 C6orf226Q5I0X4 101 aa9.4□□□□□ -0.91
COL9A1-202ENST00000357250 LYPD6BQ8NI32 183 aa9.4□□□□□ -0.91
COL9A1-202ENST00000357250 PRR20EP86478 221 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 PRR20CP86479 221 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 PRR20DP86480 221 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 PRR20BP86481 221 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 PRR20AP86496 221 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 SS18Q15532 418 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 LGALS9BQ3B8N2 356 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 LGALS9CQ6DKI2 356 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 WFDC12Q8WWY7 111 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 WT1-ASQ06250 92 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 ZFAND6Q6FIF0 208 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 CST9LQ9H4G1 147 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 A6NNC1 897 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 C1orf159Q96HA4 380 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 A0A0C4DFX4 3053 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 TRBV20-1A0A075B6N2 111 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 IGHV3-64A0A075B6Q5 118 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 A0A1W2PNU3 283 aaPredicted RBP9.39□□□□□ -0.91
COL9A1-202ENST00000357250 IGHV2-5P01817 119 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 C2orf66Q6UXQ4 117 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 POLR3KQ9Y2Y1 108 aaPredicted RBP9.39□□□□□ -0.91
COL9A1-202ENST00000357250 COX11Q9Y6N1 276 aa9.39□□□□□ -0.91
COL9A1-202ENST00000357250 IGLC1P0CG04 106 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 SYNJ2BPP57105 145 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 VWC2Q2TAL6 325 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 PRIMA1Q86XR5 153 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 SPANXDQ9BXN6 97 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 DEFB131AP59861 70 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 PMVKQ15126 192 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 BOD1L2Q8IYS8 172 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 PYGO2Q9BRQ0 406 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 ZNRD1Q9P1U0 126 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
COL9A1-202ENST00000357250 SMKR1H3BMG3 65 aa9.37□□□□□ -0.91
COL9A1-202ENST00000357250 WISP2O76076 250 aa9.37□□□□□ -0.91
COL9A1-202ENST00000357250 LINC01619G3V211 115 aa9.37□□□□□ -0.91
COL9A1-202ENST00000357250 K7EMI3 77 aa9.37□□□□□ -0.91
COL9A1-202ENST00000357250 SSBP2P81877 361 aaPredicted RBP9.37□□□□□ -0.91
COL9A1-202ENST00000357250 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
COL9A1-202ENST00000357250 C8orf86Q6ZUL3 223 aa9.37□□□□□ -0.91
COL9A1-202ENST00000357250 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms