RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 RBAKDNA6NC62 111 aa10.27□□□□□ -0.77
HOXA1-202ENST00000355633 H7BYZ3 331 aa10.27□□□□□ -0.77
HOXA1-202ENST00000355633 ID1P41134 155 aa10.27□□□□□ -0.77
HOXA1-202ENST00000355633 RAB4BP61018 213 aa10.27□□□□□ -0.77
HOXA1-202ENST00000355633 MLST8Q9BVC4 326 aa10.27□□□□□ -0.77
HOXA1-202ENST00000355633 TUBA4BQ9H853 241 aa10.27□□□□□ -0.77
HOXA1-202ENST00000355633 ZFP30Q9Y2G7 519 aa10.27□□□□□ -0.77
HOXA1-202ENST00000355633 PPP1R2P9O14990 202 aa10.26□□□□□ -0.77
HOXA1-202ENST00000355633 TFPI2P48307 235 aa10.26□□□□□ -0.77
HOXA1-202ENST00000355633 ERVFC1-1P60608 527 aa10.26□□□□□ -0.77
HOXA1-202ENST00000355633 TMEM183AQ8IXX5 376 aa10.26□□□□□ -0.77
HOXA1-202ENST00000355633 OR10G8Q8NGN5 311 aa10.26□□□□□ -0.77
HOXA1-202ENST00000355633 VGLL1Q99990 258 aa10.26□□□□□ -0.77
HOXA1-202ENST00000355633 PAFAH1B2P68402 229 aa10.26□□□□□ -0.77
HOXA1-202ENST00000355633 CXorf65A6NEN9 183 aa10.25□□□□□ -0.77
HOXA1-202ENST00000355633 K7EQG2 157 aa10.25□□□□□ -0.77
HOXA1-202ENST00000355633 PRR27Q6MZM9 219 aa10.25□□□□□ -0.77
HOXA1-202ENST00000355633 C15orf54Q8N8G6 183 aa10.25□□□□□ -0.77
HOXA1-202ENST00000355633 ASCL2Q99929 193 aa10.25□□□□□ -0.77
HOXA1-202ENST00000355633 CBY1Q9Y3M2 126 aa10.25□□□□□ -0.77
HOXA1-202ENST00000355633 ERCC8Q13216 396 aa10.24□□□□□ -0.77
HOXA1-202ENST00000355633 IBA57Q5T440 356 aaKnown RBP10.24□□□□□ -0.77
HOXA1-202ENST00000355633 RBPMS2Q6ZRY4 209 aaKnown RBP10.24□□□□□ -0.77
HOXA1-202ENST00000355633 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
HOXA1-202ENST00000355633 OSTCQ9NRP0 149 aa10.24□□□□□ -0.77
HOXA1-202ENST00000355633 SIGLEC8Q9NYZ4 499 aa10.24□□□□□ -0.77
HOXA1-202ENST00000355633 SNRPD3P62318 126 aaKnown RBP10.24□□□□□ -0.77
HOXA1-202ENST00000355633 DEFB114Q30KQ6 69 aa10.24□□□□□ -0.77
HOXA1-202ENST00000355633 TMEM61Q8N0U2 210 aa10.24□□□□□ -0.77
HOXA1-202ENST00000355633 Q8TAT8 98 aa10.24□□□□□ -0.77
HOXA1-202ENST00000355633 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
HOXA1-202ENST00000355633 SETD2Q9BYW2 2564 aaPredicted RBP10.24□□□□□ -0.77
HOXA1-202ENST00000355633 PF4P02776 101 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 RAB5BP61020 215 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 DEFA6Q01524 100 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 SAPCD1Q5SSQ6 148 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 TMEM78Q5T7P6 136 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 C9orf47Q6ZRZ4 202 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 FAM24BQ8N5W8 94 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 PRR25Q96S07 402 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 CITED1Q99966 193 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 NDFIP1Q9BT67 221 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 AGPAT4-IT1Q9H0P7 198 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 ZNF688P0C7X2 276 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 FAM231DQ6ZW35 169 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 OR10J6PQ8NGY7 276 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 C8orf49Q96NF6 230 aa10.23□□□□□ -0.77
HOXA1-202ENST00000355633 TRAV2A0A0B4J234 112 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 ZNF705DP0CH99 300 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-202ENST00000355633 ZNF705BP0CI00 300 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-202ENST00000355633 KRTAP24-1Q3LI83 254 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 CD300EQ496F6 205 aaPredicted RBP10.22□□□□□ -0.77
HOXA1-202ENST00000355633 PSMG4Q5JS54 123 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 NUDT10Q8NFP7 164 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 NUDT11Q96G61 164 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 ZC2HC1AQ96GY0 325 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 ZNF492Q9P255 531 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 V9GYV3 84 aa10.22□□□□□ -0.77
HOXA1-202ENST00000355633 UBE2CO00762 179 aa10.21□□□□□ -0.77
HOXA1-202ENST00000355633 CT45A10P0DMU9 189 aa10.21□□□□□ -0.77
HOXA1-202ENST00000355633 ZNF138P52744 262 aa10.21□□□□□ -0.77
HOXA1-202ENST00000355633 DEFB1P60022 68 aa10.21□□□□□ -0.77
HOXA1-202ENST00000355633 ELOBQ15370 118 aa10.21□□□□□ -0.77
HOXA1-202ENST00000355633 LINC00322Q6ZN03 302 aaPredicted RBP10.21□□□□□ -0.77
HOXA1-202ENST00000355633 DAZAP1Q96EP5 407 aaKnown RBP10.21□□□□□ -0.77
HOXA1-202ENST00000355633 GPR61Q9BZJ8 451 aa10.21□□□□□ -0.77
HOXA1-202ENST00000355633 WNK1Q9H4A3 2382 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 TRAV25A0A0B4J276 109 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 COLCA2A8K830 154 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 ZNF705GA8MUZ8 300 aaPredicted RBP10.21□□□□□ -0.78
HOXA1-202ENST00000355633 NPIPB6E9PJ23 425 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 F6UB75 175 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 SAP30O75446 220 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 COX8CQ7Z4L0 72 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 OR8A1Q8NGG7 326 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 LINC00477Q96M19 166 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 YPEL4Q96NS1 127 aa10.21□□□□□ -0.78
HOXA1-202ENST00000355633 C19orf71A6NCJ1 209 aa10.2□□□□□ -0.78
HOXA1-202ENST00000355633 PFN1P07737 140 aaKnown RBP10.2□□□□□ -0.78
HOXA1-202ENST00000355633 HIST1H1AQ02539 215 aaPredicted RBP10.2□□□□□ -0.78
HOXA1-202ENST00000355633 KCNIP4Q6PIL6 250 aa10.2□□□□□ -0.78
HOXA1-202ENST00000355633 IMMP2LQ96T52 175 aa10.2□□□□□ -0.78
HOXA1-202ENST00000355633 IL36BQ9NZH7 164 aa10.2□□□□□ -0.78
HOXA1-202ENST00000355633 P01737 135 aa10.19□□□□□ -0.78
HOXA1-202ENST00000355633 LBHQ53QV2 105 aaPredicted RBP10.19□□□□□ -0.78
HOXA1-202ENST00000355633 PRIMA1Q86XR5 153 aa10.19□□□□□ -0.78
HOXA1-202ENST00000355633 LINC00482Q8N8I6 264 aa10.19□□□□□ -0.78
HOXA1-202ENST00000355633 SPAG8Q99932 426 aaPredicted RBP10.19□□□□□ -0.78
HOXA1-202ENST00000355633 CRIP1P50238 77 aa10.19□□□□□ -0.78
HOXA1-202ENST00000355633 LENEPQ9Y5L5 61 aa10.19□□□□□ -0.78
HOXA1-202ENST00000355633 TGIF2-C20orf24A0A0A6YYL0 155 aa10.18□□□□□ -0.78
HOXA1-202ENST00000355633 OR4C46A6NHA9 309 aa10.18□□□□□ -0.78
HOXA1-202ENST00000355633 FAM3BP58499 235 aaPredicted RBP10.18□□□□□ -0.78
HOXA1-202ENST00000355633 RPP21Q9H633 154 aaKnown RBP10.18□□□□□ -0.78
HOXA1-202ENST00000355633 JMJD1CQ15652 2540 aa10.18□□□□□ -0.78
HOXA1-202ENST00000355633 IZUMO1RA6ND01 250 aa10.17□□□□□ -0.78
HOXA1-202ENST00000355633 CXCL1P09341 107 aa10.17□□□□□ -0.78
HOXA1-202ENST00000355633 FAM162BQ5T6X4 162 aa10.17□□□□□ -0.78
HOXA1-202ENST00000355633 GDF5OSQ5U4N7 250 aa10.17□□□□□ -0.78
HOXA1-202ENST00000355633 A0A1W2PPQ1 181 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms