RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 MYO18BQ8IUG5 2567 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 CD59P13987 128 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 TRAV1-1A0A0B4J248 108 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 SHISA9B4DS77 424 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 SLAQ13239 276 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 GFRA4Q9GZZ7 299 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 NAV3Q8IVL0 2385 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 NDUFB8O95169 186 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 HGFACQ04756 655 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 ATP6V0BQ99437 205 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 LINC00479Q96M42 142 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 RPP25LQ8N5L8 163 aaKnown RBP4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 ATP6V0E1O15342 81 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 LINC00473A8K010 186 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 RNASE2P10153 161 aaKnown RBP4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 XCL1P47992 114 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 TMEM14EPQ6UXP3 125 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 ANKRD29Q8N6D5 301 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 Q86TA4 180 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 ZNF503Q96F45 646 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 TMEM213A2RRL7 107 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1-27A0A075B6S5 117 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 Q6P435 159 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 SHANK2-AS3Q9BTD1 123 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 RBBP6Q7Z6E9 1792 aaKnown RBP4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 NCKAP5O14513 1909 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 LYPD2Q6UXB3 125 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 CRYGCP07315 174 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 LINC00205P59089 165 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 C8orf86Q6ZUL3 223 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 IGHV1-24A0A0C4DH33 117 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 BUB3O43684 328 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 ARHGAP21Q5T5U3 1957 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 PRSS57Q6UWY2 283 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 PPDPFLQ8WWR9 84 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 E7EQL1 145 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 HERVK_113P63121 156 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 C2orf66Q6UXQ4 117 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 TIMM17AQ99595 171 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 FGF16O43320 207 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 PFN1P07737 140 aaKnown RBP4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 UBE2E1P51965 193 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 Q0VFX4 171 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 C15orf62A8K5M9 175 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 ZNF362Q5T0B9 420 aaPredicted RBP4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 A0A087WV48 116 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 PRSS46E5RG02 174 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 C4orf48Q5BLP8 95 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 FAM231BA6NCW3 169 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 NTN3O00634 580 aaPredicted RBP4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 ETDCA0A1B0GVM5 59 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 CFHR4Q92496 578 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 IGHV4-4A0A075B6R2 117 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 A0A1W2PPI3 338 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 NDUFA4O00483 81 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 CEND1Q8N111 149 aa4.66□□□□□ -1.66
SRGAP1-201ENST00000355086 FUSP35637 526 aaKnown RBP eCLIP4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1-39P01597 117 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1-16P04430 117 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1D-39P04432 117 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 MLANAQ16655 118 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 HS3ST6Q96QI5 342 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 TRAV26-2A0A0B4J265 109 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 LHFPL1Q86WI0 220 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 IGHV1-69DA0A0B4J2H0 117 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 IGHV1-69P01742 117 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 TSSC4Q9Y5U2 329 aaPredicted RBP4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 NOTCH2Q04721 2471 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 Q8N8P6 123 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 CARD19Q96LW7 228 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 C1orf43Q9BWL3 253 aa4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 NOP10Q9NPE3 64 aaKnown RBP4.65□□□□□ -1.66
SRGAP1-201ENST00000355086 COLCA2A8K830 154 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 XIRP1Q702N8 1843 aaKnown RBP4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 SEC61GP60059 68 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 BAALCQ8WXS3 180 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 ANK1P16157 1881 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 NDUFB1O75438 58 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 ZNF134P52741 427 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 TRPM7Q96QT4 1865 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHV4-28A0A0C4DH34 117 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 A0A0J9YY99 117 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 IGHV2-70DA0A0C4DH43 119 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 J3QRE1 110 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 UBR3Q6ZT12 1888 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 NYNRINQ9P2P1 1898 aaKnown RBP4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 C9orf118A6NHY6 69 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 RS1O15537 224 aa4.65□□□□□ -1.67
SRGAP1-201ENST00000355086 TAF1LQ8IZX4 1826 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 ZNRD1Q9P1U0 126 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 FAM104BQ5XKR9 115 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 BRCA1P38398 1863 aaKnown RBP4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 PLXND1Q9Y4D7 1925 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 IGKV1D-17A0A075B6S4 117 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 C8orf31Q8N9H6 132 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 ZNF664Q8N3J9 261 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 PRO1854Q9UHT4 67 aa4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 PRRC2AP48634 2157 aaKnown RBP4.64□□□□□ -1.67
SRGAP1-201ENST00000355086 NHSL1Q5SYE7 1610 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms