RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 ERG28Q9UKR5 140 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 MSRB2Q9Y3D2 182 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 A0A1B0GXF2 115 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 A0A1W2PPI3 338 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 D6R8Y8 96 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 TMEM178BH3BS89 294 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 TSPAN13O95857 204 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 THBDP07204 575 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 UCNP55089 124 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 FOXI2Q6ZQN5 318 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 OR5AN1Q8NGI8 311 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 TMEM160Q9NX00 188 aa7.44□□□□□ -1.22
SMG6-202ENST00000354901 TMEM189A5PLL7 270 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 PRTN3P24158 256 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 COX7A1P24310 79 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 ZNF329Q86UD4 541 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 IFI27L1Q96BM0 104 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 GAGE12JA6NER3 117 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 CCDC179H3BU77 68 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 GAGE7O76087 117 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 GAGE12FP0CL80 117 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 GAGE12GP0CL81 117 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 GAGE12IP0CL82 117 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 GAGE4Q13068 117 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 ATP5L2Q7Z4Y8 100 aa7.43□□□□□ -1.22
SMG6-202ENST00000354901 LINC01548A6NM66 108 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 LOXP28300 417 aaPredicted RBP7.42□□□□□ -1.22
SMG6-202ENST00000354901 FOXC1Q12948 553 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 VMA21Q3ZAQ7 101 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 PIP4P2Q8N4L2 257 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 IGKV1D-37A0A075B6S9 117 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 SUB1P53999 127 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMG6-202ENST00000354901 FOXI1Q12951 378 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 FHL3Q13643 280 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 NUP37Q8NFH4 326 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 OR1L4Q8NGR5 311 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 TMEM167AQ8TBQ9 72 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 RNASE6Q93091 150 aaKnown RBP7.42□□□□□ -1.22
SMG6-202ENST00000354901 CDIP1Q9H305 208 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 LINC00574Q9H8X3 128 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 DCHS2Q6V1P9 2916 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 K7ENP7 123 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 GPR82Q96P67 336 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 VCX2Q9H322 139 aa7.42□□□□□ -1.22
SMG6-202ENST00000354901 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
SMG6-202ENST00000354901 TRBV25-1A0A075B6N4 114 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 IGLV2-23P01705 113 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 GOLT1AQ6ZVE7 132 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 FOXC2Q99958 501 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 SPXQ9BT56 116 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 MRPL32Q9BYC8 188 aaKnown RBP7.41□□□□□ -1.22
SMG6-202ENST00000354901 NGBQ9NPG2 151 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 SIGLEC8Q9NYZ4 499 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 TNFRSF18Q9Y5U5 241 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 S4R3C0 116 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 PLGLAQ15195 96 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 C12orf74Q32Q52 190 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 TTC9CQ8N5M4 171 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 EPDR1Q9UM22 224 aa7.41□□□□□ -1.22
SMG6-202ENST00000354901 A0A1B0GUT8 65 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 TMEM213A2RRL7 107 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 LY6HO94772 140 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 FXYD5Q96DB9 178 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 RAB1BQ9H0U4 201 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 FBXL15Q9H469 300 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 SOX21Q9Y651 276 aaPredicted RBP7.4□□□□□ -1.22
SMG6-202ENST00000354901 E7EQL1 145 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 IGHV1-8P0DP01 117 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 RPL27AP46776 148 aaKnown RBP7.4□□□□□ -1.22
SMG6-202ENST00000354901 LYZP61626 148 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 GAGE2EQ4V326 116 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 NFE4Q86UQ8 179 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 LINC01560Q8TB33 94 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 SCNM1Q9BWG6 230 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 TM2D2Q9BX73 214 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 GAGE2DQ9UEU5 116 aa7.4□□□□□ -1.22
SMG6-202ENST00000354901 CEND1Q8N111 149 aa7.4□□□□□ -1.23
SMG6-202ENST00000354901 PPDPFQ9H3Y8 114 aa7.4□□□□□ -1.23
SMG6-202ENST00000354901 HBDP02042 147 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 CT45A10P0DMU9 189 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 EVI2AP22794 236 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 MRPL23Q16540 153 aaKnown RBP7.39□□□□□ -1.23
SMG6-202ENST00000354901 BSNQ9UPA5 3926 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 A4D1N5 150 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 E9PLD3 99 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 RBP4P02753 201 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMG6-202ENST00000354901 RIGQ13278 110 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 TMEM30BQ3MIR4 351 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 NDUFA3O95167 84 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 ATP5IP56385 69 aaPredicted RBP7.39□□□□□ -1.23
SMG6-202ENST00000354901 EXOC3-AS1Q8N2X6 119 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 TMEM133Q9H2Q1 129 aa7.39□□□□□ -1.23
SMG6-202ENST00000354901 H7C2G1 150 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 CKS2P33552 79 aa7.38□□□□□ -1.23
SMG6-202ENST00000354901 KLRD1Q13241 179 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms