RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 IFI6P09912 130 aa8.06□□□□□ -1.12
COL11A1-201ENST00000353414 NDUFB8O95169 186 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 LINC00271P0C7V0 271 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 SMIM2Q9BVW6 85 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 OSTCQ9NRP0 149 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
COL11A1-201ENST00000353414 IGHV1-69DA0A0B4J2H0 117 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 IGHV1-69P01742 117 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 MPV17L2Q567V2 206 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 CHCHD1Q96BP2 118 aaKnown RBP8.05□□□□□ -1.12
COL11A1-201ENST00000353414 PCNX1Q96RV3 2341 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 AGMATQ9BSE5 352 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 SRRM5B3KS81 715 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BLQ99880 126 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 NDUFS7O75251 213 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 CRYGCP07315 174 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 DNAJC30Q96LL9 226 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 C1orf43Q9BWL3 253 aa8.05□□□□□ -1.12
COL11A1-201ENST00000353414 PPBPP02775 128 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 BAALCQ8WXS3 180 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 CHAC1Q9BUX1 264 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 RBM3P98179 157 aaKnown RBP8.04□□□□□ -1.12
COL11A1-201ENST00000353414 FNDC1Q4ZHG4 1894 aaPredicted RBP8.04□□□□□ -1.12
COL11A1-201ENST00000353414 CRLF1O75462 422 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 HLA-DRB4P13762 266 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 HLA-DRB4X5D2U9 266 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 CNOT1A5YKK6 2376 aaKnown RBP8.04□□□□□ -1.12
COL11A1-201ENST00000353414 F8W735 103 aaPredicted RBP8.04□□□□□ -1.12
COL11A1-201ENST00000353414 FLVCR1-AS1Q8TAF5 88 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 TRGV9Q99603 122 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 TMEM243Q9BU79 118 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 CARHSP1Q9Y2V2 147 aaKnown RBP8.04□□□□□ -1.12
COL11A1-201ENST00000353414 H0YIZ8 118 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 LINC00114Q6XXX2 140 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 C8orf86Q6ZUL3 223 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 C9orf139Q6ZV77 190 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 DSCR8Q96T75 97 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 A0A087WWC5 75 aa8.04□□□□□ -1.12
COL11A1-201ENST00000353414 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 GAS1P54826 345 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 K7ENP7 123 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 TRPT1Q86TN4 253 aaKnown RBP8.03□□□□□ -1.12
COL11A1-201ENST00000353414 F6UB75 175 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 SOCS3O14543 225 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 BUB3O43684 328 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 GRNP28799 593 aaKnown RBP8.03□□□□□ -1.12
COL11A1-201ENST00000353414 REG4Q9BYZ8 158 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 IGLV3-12A0A075B6K2 115 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 TPSG1Q9NRR2 321 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 SS18L2Q9UHA2 77 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.03□□□□□ -1.12
COL11A1-201ENST00000353414 A0A1B0GUS0 222 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 IGKV2-29A2NJV5 120 aaPredicted RBP8.03□□□□□ -1.12
COL11A1-201ENST00000353414 SLURP1P55000 103 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 HS3ST6Q96QI5 342 aa8.03□□□□□ -1.12
COL11A1-201ENST00000353414 IGHV4-59P01825 116 aa8.02□□□□□ -1.12
COL11A1-201ENST00000353414 AMBPP02760 352 aa8.02□□□□□ -1.12
COL11A1-201ENST00000353414 LY6G5BQ8NDX9 201 aa8.02□□□□□ -1.12
COL11A1-201ENST00000353414 NOTCH3Q9UM47 2321 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 DIAPH2-AS1Q14236 149 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 GFI1Q99684 422 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 A0A1W2PPI3 338 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 CCL24O00175 119 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 FBLIM1Q8WUP2 373 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 TSSC4Q9Y5U2 329 aaPredicted RBP8.02□□□□□ -1.13
COL11A1-201ENST00000353414 FAM90A9PA6NNJ1 464 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 K7EMI3 77 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 RNASE2P10153 161 aaKnown RBP8.02□□□□□ -1.13
COL11A1-201ENST00000353414 VWA8A3KMH1 1905 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 PLXNA4Q9HCM2 1894 aa8.02□□□□□ -1.13
COL11A1-201ENST00000353414 DLEU1O43261 78 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 HLA-DMBP28068 263 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 WIPF3A6NGB9 483 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 I3L3M4 83 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 IFITM1P13164 125 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 ZC2HC1BQ5TFG8 222 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 SPATA25Q9BR10 227 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 Q6P435 159 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 CRYGSP22914 178 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 HIST2H2BDQ6DRA6 164 aa8.01□□□□□ -1.13
COL11A1-201ENST00000353414 PKDREJQ9NTG1 2253 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 IGHV2-70DA0A0C4DH43 119 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 TEX48A0A1B0GUV7 120 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 UBE2CO00762 179 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 DEFB112Q30KQ8 113 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 C2orf16Q68DN1 1984 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 IGHG4P01861 327 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 SIP14410 1827 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 TNRC6BQ9UPQ9 1833 aaKnown RBP8□□□□□ -1.13
COL11A1-201ENST00000353414 A0A0G2JRQ6 117 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 GNRH2O43555 120 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 WDR86Q86TI4 376 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 TRAV9-1A0A075B6T8 112 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 ZFP36P26651 326 aaKnown RBP8□□□□□ -1.13
COL11A1-201ENST00000353414 C5orf38Q86SI9 138 aa8□□□□□ -1.13
COL11A1-201ENST00000353414 WFDC9Q8NEX5 89 aa7.99□□□□□ -1.13
COL11A1-201ENST00000353414 ROS1P08922 2347 aa7.99□□□□□ -1.13
COL11A1-201ENST00000353414 GOLGB1Q14789 3259 aaKnown RBP7.99□□□□□ -1.13
COL11A1-201ENST00000353414 FAM231BA6NCW3 169 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms