RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TRBV6-1A0A0K0K1D8 114 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 NPFFO15130 113 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 NCR2O95944 276 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 FAM106CPP0CH98 169 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 FAM106AQ4KMX7 169 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 Q5PR19 223 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 C12orf54Q6X4T0 127 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 SIGLEC15Q6ZMC9 328 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 Q8N6K4 173 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 TMEM75Q8N9X5 138 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 PIFOQ8TCI5 191 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 MS4A6AQ9H2W1 248 aa6.7□□□□□ -1.34
TRIM55-204ENST00000353317 M0R3E3 92 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 SNAI2O43623 268 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 CDKN1BP46527 198 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 BPIFA4PQ86YQ2 179 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 WFDC11Q8NEX6 87 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 TPPP3Q9BW30 176 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 NF1P21359 2839 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 K7EIM0 57 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 SLC25A16P16260 332 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 CEACAM3P40198 252 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 HIST1H1AQ02539 215 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-204ENST00000353317 LOXL1Q08397 574 aaPredicted RBP6.69□□□□□ -1.34
TRIM55-204ENST00000353317 RIGQ13278 110 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 HES1Q14469 280 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 PSG3Q16557 428 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 MINOS1Q5TGZ0 78 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 AMMECR1LQ6DCA0 310 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 C2orf91Q6ZV80 131 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 GATD1Q8NB37 220 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 Q96MF0 132 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 SHANK2-AS3Q9BTD1 123 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 MINOS1-NBL1R4GNA1 71 aa6.69□□□□□ -1.34
TRIM55-204ENST00000353317 A0A096LNJ9 63 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 IGHV1-69DA0A0B4J2H0 117 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 CBY3A6NI87 242 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 B4DSR2 109 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 H3BRN7 92 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 NDUFA3O95167 84 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 IGHV1-69P01742 117 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 IFI27P40305 119 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-204ENST00000353317 DSCR9P59020 149 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 NDPQ00604 133 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 EBI3Q14213 229 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 BCL6BQ8N143 479 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-204ENST00000353317 ZNF491Q8N8L2 437 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 NPBQ8NG41 125 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 PRSS3P2Q8NHM4 247 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 BEX4Q9NWD9 120 aaPredicted RBP6.68□□□□□ -1.34
TRIM55-204ENST00000353317 LINC01548A6NM66 108 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 MRPS12O15235 138 aaKnown RBP6.68□□□□□ -1.34
TRIM55-204ENST00000353317 IGHV4-31P0DP07 118 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 COX8AP10176 69 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 GPR183P32249 361 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 PLGLAQ15195 96 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 OR10AG1Q8NH19 301 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 C8orf49Q96NF6 230 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 RNF24Q9Y225 148 aa6.68□□□□□ -1.34
TRIM55-204ENST00000353317 NBR2O15453 112 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 CD5LO43866 347 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 TGFAP01135 160 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 IL4P05112 153 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 CSN1S1P47710 185 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 FA2HQ7L5A8 372 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 ZNF414Q96IQ9 312 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 S4R3C0 116 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 OTOGQ6ZRI0 2925 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 TRAV8-6A0A0B4J262 113 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 LOC389332A0A1B0GUA5 103 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 D6R8Y8 96 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 K7EQM0 130 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 CNIH1O95406 144 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 FCGR2BP31994 310 aaPredicted RBP6.67□□□□□ -1.34
TRIM55-204ENST00000353317 PSG9Q00887 426 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 RNF151Q2KHN1 245 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 C5orf64Q2M2E5 130 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 ZNF493Q6ZR52 646 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 TMEM219Q86XT9 240 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 LRRC75A-AS1Q8N1F1 130 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 LYPD1Q8N2G4 141 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 Q8N9W7 124 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 RNF125Q96EQ8 232 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 MTORP42345 2549 aa6.67□□□□□ -1.34
TRIM55-204ENST00000353317 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
TRIM55-204ENST00000353317 TMSB15BA0A087X1C1 80 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 A0A1B0GW15 77 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 TMEM213A2RRL7 107 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 NCBP2LA6PVI3 153 aaKnown RBP6.66□□□□□ -1.34
TRIM55-204ENST00000353317 EGR2P11161 476 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-204ENST00000353317 RNF5Q99942 180 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 CST9LQ9H4G1 147 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 SIGLEC8Q9NYZ4 499 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 SERTM2A0A1B0GWG4 89 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 FGF6P10767 208 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 TMEM11P17152 192 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 FXYD7P58549 80 aa6.66□□□□□ -1.34
TRIM55-204ENST00000353317 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms