RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 RNASE7Q9H1E1 156 aaKnown RBP9.67□□□□□ -0.86
SMAD9-201ENST00000350148 TRAV12-3A0A0B4J271 114 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 IGLC1P0CG04 106 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 SLC25A2Q9BXI2 301 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 TRGV11A0A075B6L2 103 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 CT83Q5H943 113 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 C11orf1Q9H5F2 150 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 TPSG1Q9NRR2 321 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 J3KT08 172 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 ZNF726P1Q15940 193 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 PAPPA-AS1Q5QFB9 102 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 ADAMTS20P59510 1910 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 EML6Q6ZMW3 1958 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 IGHV4-61A0A0C4DH41 118 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 KLK15Q9H2R5 256 aa9.66□□□□□ -0.86
SMAD9-201ENST00000350148 LINC01549A6NIU2 74 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 SRD5A1P18405 259 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 ATXN8Q156A1 80 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 PRELID3AQ96N28 172 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 SIRPDQ9H106 197 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 NDUFS7O75251 213 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 NDUFA3O95167 84 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 HTN1P15515 57 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 ORMDL3Q8N138 153 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 SVIPQ8NHG7 77 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 LINC00527Q9UJ94 153 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 CACNA1BQ00975 2339 aa9.65□□□□□ -0.86
SMAD9-201ENST00000350148 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.65□□□□□ -0.87
SMAD9-201ENST00000350148 K7EP34 96 aa9.65□□□□□ -0.87
SMAD9-201ENST00000350148 RPL15P61313 204 aaKnown RBP9.65□□□□□ -0.87
SMAD9-201ENST00000350148 C11orf71Q6IPW1 123 aa9.65□□□□□ -0.87
SMAD9-201ENST00000350148 NCKAP5O14513 1909 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 TRBV19A0A075B6N1 114 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 LCN12Q6JVE5 192 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 KIR2DL4Q99706 377 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 FREM1Q5H8C1 2179 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 IGHV3OR16-8A0A075B7F1 116 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 F8W1H4 67 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 TMEM170BQ5T4T1 132 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 MED12LQ86YW9 2145 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 ZNF318Q5VUA4 2279 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 FAM181BA6NEQ2 426 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 H3BRM9 83 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 IGLV2-23P01705 113 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 LINC01559Q495D7 138 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 Q86TA4 180 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 TMEM89A2RUT3 159 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 RNASE4P34096 147 aaKnown RBP9.64□□□□□ -0.87
SMAD9-201ENST00000350148 EIF4EBP1Q13541 118 aaPredicted RBP9.64□□□□□ -0.87
SMAD9-201ENST00000350148 ETDBQ3ZM63 59 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 FAM231DQ6ZW35 169 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 TMEM126AQ9H061 195 aa9.64□□□□□ -0.87
SMAD9-201ENST00000350148 TRBV20OR9-2A0A075B6H5 130 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 C9orf118A6NHY6 69 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 EXOC3-AS1Q8N2X6 119 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 VPREB3Q9UKI3 123 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 Q8N7P7 452 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 RHPN1-AS1Q9BWJ2 59 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 IGHV4-30-2A0A087WSY4 118 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 CCL25O15444 150 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 CRYGCP07315 174 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 RNF114Q9Y508 228 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 C3orf79P0CE67 100 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 ACTL10Q5JWF8 245 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 Q6ZPA2 131 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 YLPM1P49750 1951 aaKnown RBP9.63□□□□□ -0.87
SMAD9-201ENST00000350148 CADP27708 2225 aa9.63□□□□□ -0.87
SMAD9-201ENST00000350148 hDV102S1A0JD36 115 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 ODF3BA8MYP8 253 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 V9GYY9 64 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 CPAMD8Q8IZJ3 1885 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 PKDREJQ9NTG1 2253 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 STHQ8IWL8 128 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
SMAD9-201ENST00000350148 TMEM258P61165 79 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 TDRG1Q3Y452 100 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 CHCHD1Q96BP2 118 aaKnown RBP9.62□□□□□ -0.87
SMAD9-201ENST00000350148 DUX3Q96PT4 197 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 C1QTNF4Q9BXJ3 329 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 PGPEP1Q9NXJ5 209 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
SMAD9-201ENST00000350148 LOXL1Q08397 574 aaPredicted RBP9.61□□□□□ -0.87
SMAD9-201ENST00000350148 FAM120AOSQ5T036 256 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 C22orf34Q6ZV56 151 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 ROS1P08922 2347 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 ANXA2RQ3ZCQ2 193 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 DPM2O94777 84 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 LINC01619G3V211 115 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 I3L2K1 104 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
SMAD9-201ENST00000350148 IGKV2-40A0A087WW87 121 aaPredicted RBP9.6□□□□□ -0.87
SMAD9-201ENST00000350148 G3V318 75 aa9.6□□□□□ -0.87
SMAD9-201ENST00000350148 IGKV2D-40P01614 121 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms