RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 TMEM133Q9H2Q1 129 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 RALYQ9UKM9 306 aaKnown RBP12.43□□□□□ -0.42
HMGA1-202ENST00000347617 ADGRG4Q8IZF6 3080 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 TMEM213A2RRL7 107 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 LINC01619G3V211 115 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 MRPS12O15235 138 aaKnown RBP12.43□□□□□ -0.42
HMGA1-202ENST00000347617 IGKCP01834 107 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 RBP4P02753 201 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 AZU1P20160 251 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 DIAPH2-AS1Q14236 149 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 ODF1Q14990 250 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 PRSS57Q6UWY2 283 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 CEND1Q8N111 149 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 ZNF502Q8TBZ5 544 aa12.43□□□□□ -0.42
HMGA1-202ENST00000347617 NAA38Q9BRA0 125 aaKnown RBP12.43□□□□□ -0.42
HMGA1-202ENST00000347617 WI2-2373I1.2A0A1W2PRP0 233 aa12.42□□□□□ -0.42
HMGA1-202ENST00000347617 DPM2O94777 84 aa12.42□□□□□ -0.42
HMGA1-202ENST00000347617 NPYP01303 97 aa12.42□□□□□ -0.42
HMGA1-202ENST00000347617 IGKV1-17P01599 117 aa12.42□□□□□ -0.42
HMGA1-202ENST00000347617 TWIST1Q15672 202 aa12.42□□□□□ -0.42
HMGA1-202ENST00000347617 PPP1R27Q86WC6 154 aa12.42□□□□□ -0.42
HMGA1-202ENST00000347617 TIMD4Q96H15 378 aa12.42□□□□□ -0.42
HMGA1-202ENST00000347617 A0A1W2PRD5 423 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 A0A1W2PRF3 423 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 A0A1W2PRM7 423 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 GAGE12HA6NDE8 117 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 IGHV1-8P0DP01 117 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 FCGR2BP31994 310 aaPredicted RBP12.41□□□□□ -0.42
HMGA1-202ENST00000347617 FXYD2P54710 66 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 RNF125Q96EQ8 232 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 CNFNQ9BYD5 112 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 ACACBO00763 2458 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 GNG7O60262 68 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 KLF17Q5JT82 389 aaPredicted RBP12.41□□□□□ -0.42
HMGA1-202ENST00000347617 ZNF562Q6V9R5 426 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 ZNF48Q96MX3 618 aaPredicted RBP12.41□□□□□ -0.42
HMGA1-202ENST00000347617 SPANXB1Q9NS25 103 aaPredicted RBP12.41□□□□□ -0.42
HMGA1-202ENST00000347617 HHLA3Q9XRX5 114 aa12.41□□□□□ -0.42
HMGA1-202ENST00000347617 MTURNQ8N3F0 131 aa12.4□□□□□ -0.42
HMGA1-202ENST00000347617 ZNF491Q8N8L2 437 aa12.4□□□□□ -0.42
HMGA1-202ENST00000347617 ATP6V0BQ99437 205 aa12.4□□□□□ -0.42
HMGA1-202ENST00000347617 ABCA4P78363 2273 aa12.39□□□□□ -0.43
HMGA1-202ENST00000347617 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
HMGA1-202ENST00000347617 IGHV3-21A0A0B4J1V1 117 aa12.39□□□□□ -0.43
HMGA1-202ENST00000347617 ARPC1AQ92747 370 aa12.39□□□□□ -0.43
HMGA1-202ENST00000347617 C8orf49Q96NF6 230 aa12.39□□□□□ -0.43
HMGA1-202ENST00000347617 IGLL5B9A064 214 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 TCTEX1D4Q5JR98 221 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 NBEAQ8NFP9 2946 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 LYNX1G3V0Z9 82 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 LYNX1P0DP58 116 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 LEPP41159 167 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 Q71RC1 249 aaPredicted RBP12.38□□□□□ -0.43
HMGA1-202ENST00000347617 ZNF479Q96JC4 524 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 PRR25Q96S07 402 aa12.38□□□□□ -0.43
HMGA1-202ENST00000347617 TSSC4Q9Y5U2 329 aaPredicted RBP12.38□□□□□ -0.43
HMGA1-202ENST00000347617 A0A1W2PPR1 153 aa12.37□□□□□ -0.43
HMGA1-202ENST00000347617 C19orf84I3L1E1 186 aa12.37□□□□□ -0.43
HMGA1-202ENST00000347617 K7EIM0 57 aa12.37□□□□□ -0.43
HMGA1-202ENST00000347617 PRSS1P07477 247 aa12.37□□□□□ -0.43
HMGA1-202ENST00000347617 Q8N8P6 123 aa12.37□□□□□ -0.43
HMGA1-202ENST00000347617 LY6G5BQ8NDX9 201 aa12.37□□□□□ -0.43
HMGA1-202ENST00000347617 C17orf77Q96MU5 243 aa12.37□□□□□ -0.43
HMGA1-202ENST00000347617 NHP2Q9NX24 153 aaKnown RBP12.37□□□□□ -0.43
HMGA1-202ENST00000347617 IGHV1-3A0A0C4DH29 117 aa12.36□□□□□ -0.43
HMGA1-202ENST00000347617 PRSS47A8MTI9 375 aa12.36□□□□□ -0.43
HMGA1-202ENST00000347617 SCGB2A1O75556 95 aa12.36□□□□□ -0.43
HMGA1-202ENST00000347617 RPL7P18124 248 aaKnown RBP12.36□□□□□ -0.43
HMGA1-202ENST00000347617 TTC9CQ8N5M4 171 aa12.36□□□□□ -0.43
HMGA1-202ENST00000347617 GTSF1LQ9H1H1 148 aa12.36□□□□□ -0.43
HMGA1-202ENST00000347617 SPTBN1Q01082 2364 aaKnown RBP12.36□□□□□ -0.43
HMGA1-202ENST00000347617 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 IL4P05112 153 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 EFNA4P52798 201 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 ATP6V0E2Q8NHE4 81 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 TMSB15BA0A087X1C1 80 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 IGKV2D-26A0A0A0MRZ7 120 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 TNFRSF6BO95407 300 aa12.35□□□□□ -0.43
HMGA1-202ENST00000347617 KALRNO60229 2985 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 A0A1B0GWB2 263 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 NPIPB5A8MRT5 1133 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 M0R3E3 92 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 EGR2P11161 476 aaPredicted RBP12.34□□□□□ -0.43
HMGA1-202ENST00000347617 SMAGPQ0VAQ4 97 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 GAGE13Q4V321 117 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 TM4SF20Q53R12 229 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 LCNL1Q6ZST4 164 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 FOXC2Q99958 501 aa12.34□□□□□ -0.43
HMGA1-202ENST00000347617 SMKR1H3BMG3 65 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 PLNP26678 52 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 CNTFRP26992 372 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 RRN3P1Q2M238 152 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 C12orf74Q32Q52 190 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 ZC2HC1BQ5TFG8 222 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 C1orf122Q6ZSJ8 110 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 MYOZ3Q8TDC0 251 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms