RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 PRR25Q96S07 402 aa12.25□□□□□ -0.45
LRP8-202ENST00000347547 IGLV2-18A0A075B6J9 118 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 TRAV40A0A0B4J280 105 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 OR11H12B2RN74 326 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 APELAP0DMC3 54 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 DLX6P56179 175 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 OR11H1Q8NG94 326 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 OR11H2Q8NH07 326 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 SRSF8Q9BRL6 282 aaKnown RBP12.24□□□□□ -0.45
LRP8-202ENST00000347547 CACNA1GO43497 2377 aa12.24□□□□□ -0.45
LRP8-202ENST00000347547 SPINK8P0C7L1 97 aa12.23□□□□□ -0.45
LRP8-202ENST00000347547 SYT8Q8NBV8 401 aa12.23□□□□□ -0.45
LRP8-202ENST00000347547 RNF125Q96EQ8 232 aa12.23□□□□□ -0.45
LRP8-202ENST00000347547 TMEM160Q9NX00 188 aa12.23□□□□□ -0.45
LRP8-202ENST00000347547 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
LRP8-202ENST00000347547 A0A087WX48 190 aa12.23□□□□□ -0.45
LRP8-202ENST00000347547 PLNP26678 52 aa12.23□□□□□ -0.45
LRP8-202ENST00000347547 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
LRP8-202ENST00000347547 INTS1Q8N201 2190 aaKnown RBP12.22□□□□□ -0.45
LRP8-202ENST00000347547 RIF1Q5UIP0 2472 aaKnown RBP12.22□□□□□ -0.45
LRP8-202ENST00000347547 NCBP2LA6PVI3 153 aaKnown RBP12.22□□□□□ -0.45
LRP8-202ENST00000347547 K7EIM0 57 aa12.22□□□□□ -0.45
LRP8-202ENST00000347547 SMCPP49901 116 aaPredicted RBP12.22□□□□□ -0.45
LRP8-202ENST00000347547 IGF2-ASQ6U949 168 aa12.22□□□□□ -0.45
LRP8-202ENST00000347547 PPP1R27Q86WC6 154 aa12.22□□□□□ -0.45
LRP8-202ENST00000347547 GVINP1Q7Z2Y8 2422 aa12.21□□□□□ -0.45
LRP8-202ENST00000347547 GAS8-AS1O95177 125 aa12.21□□□□□ -0.45
LRP8-202ENST00000347547 CNTFRP26992 372 aa12.21□□□□□ -0.45
LRP8-202ENST00000347547 DLX4Q92988 240 aaPredicted RBP12.21□□□□□ -0.45
LRP8-202ENST00000347547 VCX2Q9H322 139 aa12.21□□□□□ -0.45
LRP8-202ENST00000347547 ERG28Q9UKR5 140 aa12.21□□□□□ -0.45
LRP8-202ENST00000347547 ZFHX2Q9C0A1 2572 aaPredicted RBP12.21□□□□□ -0.45
LRP8-202ENST00000347547 SPENQ96T58 3664 aaKnown RBP12.21□□□□□ -0.45
LRP8-202ENST00000347547 IGHV3-72A0A0B4J1Y9 119 aa12.21□□□□□ -0.46
LRP8-202ENST00000347547 Q6ZUT4 128 aa12.21□□□□□ -0.46
LRP8-202ENST00000347547 MYOZ3Q8TDC0 251 aa12.21□□□□□ -0.46
LRP8-202ENST00000347547 RPEQ96AT9 228 aa12.21□□□□□ -0.46
LRP8-202ENST00000347547 MSRB1Q9NZV6 116 aa12.21□□□□□ -0.46
LRP8-202ENST00000347547 ZFHX4Q86UP3 3567 aa12.2□□□□□ -0.46
LRP8-202ENST00000347547 ZNF80P51504 273 aaPredicted RBP12.2□□□□□ -0.46
LRP8-202ENST00000347547 ZNF474Q6S9Z5 364 aaPredicted RBP12.2□□□□□ -0.46
LRP8-202ENST00000347547 TNFRSF13BO14836 293 aaPredicted RBP12.2□□□□□ -0.46
LRP8-202ENST00000347547 HOXA3O43365 443 aaPredicted RBP12.2□□□□□ -0.46
LRP8-202ENST00000347547 IL4P05112 153 aa12.2□□□□□ -0.46
LRP8-202ENST00000347547 IGKV2-40A0A087WW87 121 aaPredicted RBP12.19□□□□□ -0.46
LRP8-202ENST00000347547 TRAV12-1A0A0B4J245 112 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 IGKV2D-40P01614 121 aaPredicted RBP12.19□□□□□ -0.46
LRP8-202ENST00000347547 MT-ATP8P03928 68 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 PRB4P10163 310 aaPredicted RBP12.19□□□□□ -0.46
LRP8-202ENST00000347547 TMEM155Q4W5P6 130 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 NFE4Q86UQ8 179 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 CADP27708 2225 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 MBD3L4A6NDZ8 208 aaPredicted RBP12.19□□□□□ -0.46
LRP8-202ENST00000347547 MBD3L3A6NE82 208 aaPredicted RBP12.19□□□□□ -0.46
LRP8-202ENST00000347547 MBD3L5A6NJ08 208 aaPredicted RBP12.19□□□□□ -0.46
LRP8-202ENST00000347547 NDUFB3O43676 98 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 IGHV1-8P0DP01 117 aa12.19□□□□□ -0.46
LRP8-202ENST00000347547 MBD3L2Q8NHZ7 208 aaPredicted RBP12.19□□□□□ -0.46
LRP8-202ENST00000347547 ASPMQ8IZT6 3477 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 CFAP47Q6ZTR5 3102 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 AKAP13Q12802 2813 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 CEP250Q9BV73 2442 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 FHL3Q13643 280 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 LAGE3Q14657 143 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 FDCSPQ8NFU4 85 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 RAB1BQ9H0U4 201 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 LOXP28300 417 aaPredicted RBP12.18□□□□□ -0.46
LRP8-202ENST00000347547 XGP55808 180 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 SEM1Q6ZVN7 128 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 PPDPFLQ8WWR9 84 aa12.18□□□□□ -0.46
LRP8-202ENST00000347547 ARFGEF3Q5TH69 2177 aa12.17□□□□□ -0.46
LRP8-202ENST00000347547 PPIFP30405 207 aaKnown RBP12.17□□□□□ -0.46
LRP8-202ENST00000347547 DTX2Q86UW9 622 aa12.17□□□□□ -0.46
LRP8-202ENST00000347547 PGPEP1Q9NXJ5 209 aa12.17□□□□□ -0.46
LRP8-202ENST00000347547 SVILO95425 2214 aa12.17□□□□□ -0.46
LRP8-202ENST00000347547 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
LRP8-202ENST00000347547 CCL8P80075 99 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 ZNF672Q499Z4 452 aaPredicted RBP12.16□□□□□ -0.46
LRP8-202ENST00000347547 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 NUP37Q8NFH4 326 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 A6NJY4 79 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 FABP5P3A8MUU1 101 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 F8VRH5 84 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 H7C1H1 209 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 IL17RELQ6ZVW7 336 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 RNF5Q99942 180 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 ICE1Q9Y2F5 2266 aa12.16□□□□□ -0.46
LRP8-202ENST00000347547 IGHV1-3A0A0C4DH29 117 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 TMEM178BH3BS89 294 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 UBE2D1P51668 147 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 UBE2D3P61077 147 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 UBE2D2P62837 147 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 NRACQ8N912 160 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 RNF183Q96D59 192 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 FBXL15Q9H469 300 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 PLXNB1O43157 2135 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 ORM1P02763 201 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 LYRM7Q5U5X0 104 aa12.15□□□□□ -0.46
LRP8-202ENST00000347547 TEN1Q86WV5 123 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms