RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 WT1P19544 449 aaPredicted RBP8.69□□□□□ -1.02
CLCN6-202ENST00000346436 ARL17AQ8IVW1 177 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 USF3Q68DE3 2245 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 GTF3C1Q12789 2109 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.69□□□□□ -1.02
CLCN6-202ENST00000346436 C15orf65H3BRN8 121 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 WISP2O76076 250 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 LOXP28300 417 aaPredicted RBP8.69□□□□□ -1.02
CLCN6-202ENST00000346436 KRTAP27-1Q3LI81 207 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 DNLZQ5SXM8 178 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 TSKUQ8WUA8 353 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 HTTP42858 3142 aa8.69□□□□□ -1.02
CLCN6-202ENST00000346436 TRBV25-1A0A075B6N4 114 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 IGKV3D-20A0A0C4DH25 116 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 PMS2P5A8MQ11 134 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 FBXL19-AS1Q494R0 122 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 TTC32Q5I0X7 151 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 Q6ZSR3 168 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 SNHG12Q9BXW3 62 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 DIAPH2-AS1Q14236 149 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 C15orf53Q8NAA6 179 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 TM2D2Q9BX73 214 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 ZFHX2Q9C0A1 2572 aaPredicted RBP8.68□□□□□ -1.02
CLCN6-202ENST00000346436 PAX4O43316 350 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 C17orf58Q2M2W7 97 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 C11orf53Q8IXP5 236 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 NKAPP1Q8N9T2 125 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 SPAG8Q99932 426 aaPredicted RBP8.68□□□□□ -1.02
CLCN6-202ENST00000346436 TMEM160Q9NX00 188 aa8.68□□□□□ -1.02
CLCN6-202ENST00000346436 hDV102S1A0JD36 115 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 GGTLC3B5MD39 225 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 K7EM74 188 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 Q6ZWC4 215 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 LINC00614P0C842 121 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
CLCN6-202ENST00000346436 PLA2G2AP14555 144 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 AZU1P20160 251 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 TMEM14BQ9NUH8 114 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 A8MWV9 139 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 TSPAN13O95857 204 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 IGLV2-14P01704 120 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 SPXQ9BT56 116 aa8.67□□□□□ -1.02
CLCN6-202ENST00000346436 YPEL3P61236 119 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-202ENST00000346436 SSBP2P81877 361 aaPredicted RBP8.66□□□□□ -1.02
CLCN6-202ENST00000346436 TTC28Q96AY4 2481 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 GAGE12BA1L429 117 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 K7EN84 100 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 GAGE7O76087 117 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 GAGE12FP0CL80 117 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 GAGE12GP0CL81 117 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 GAGE12IP0CL82 117 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 ODF3L1Q8IXM7 274 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 C5orf30Q96GV9 206 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 IGHV3-73A0A0B4J1V6 119 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 PCNX2A6NKB5 2137 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 NPIPB5A8MRT5 1133 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 TEX43Q6ZNM6 134 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 NUPR1O60356 82 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 PDE6HQ13956 83 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 TTC9CQ8N5M4 171 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 FOXC2Q99958 501 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
CLCN6-202ENST00000346436 TPSG1Q9NRR2 321 aa8.66□□□□□ -1.02
CLCN6-202ENST00000346436 IGKV2-40A0A087WW87 121 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-202ENST00000346436 IGKV2D-40P01614 121 aaPredicted RBP8.65□□□□□ -1.02
CLCN6-202ENST00000346436 RNF183Q96D59 192 aa8.65□□□□□ -1.02
CLCN6-202ENST00000346436 C1orf159Q96HA4 380 aa8.65□□□□□ -1.02
CLCN6-202ENST00000346436 VCYO14598 125 aa8.65□□□□□ -1.02
CLCN6-202ENST00000346436 G3V318 75 aa8.65□□□□□ -1.02
CLCN6-202ENST00000346436 NDUFS7O75251 213 aa8.65□□□□□ -1.02
CLCN6-202ENST00000346436 PLNP26678 52 aa8.65□□□□□ -1.02
CLCN6-202ENST00000346436 ATP6V0BQ99437 205 aa8.65□□□□□ -1.02
CLCN6-202ENST00000346436 A0A1W2PPI3 338 aa8.65□□□□□ -1.03
CLCN6-202ENST00000346436 TCRAP04437 139 aa8.65□□□□□ -1.03
CLCN6-202ENST00000346436 C8orf86Q6ZUL3 223 aa8.65□□□□□ -1.03
CLCN6-202ENST00000346436 ARL6IP6Q8N6S5 226 aa8.65□□□□□ -1.03
CLCN6-202ENST00000346436 NOTCH2Q04721 2471 aa8.65□□□□□ -1.03
CLCN6-202ENST00000346436 A0A1W2PNU3 283 aaPredicted RBP8.64□□□□□ -1.03
CLCN6-202ENST00000346436 NCR2O95944 276 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 HOXB4P17483 251 aaPredicted RBP8.64□□□□□ -1.03
CLCN6-202ENST00000346436 V9GYV3 84 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 LAMA3Q16787 3333 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 ATP5G1P05496 136 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 HOXD3P31249 432 aaPredicted RBP8.64□□□□□ -1.03
CLCN6-202ENST00000346436 CDKN1BP46527 198 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 LINC01559Q495D7 138 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 DEFB104AQ8WTQ1 72 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 SLC25A2Q9BXI2 301 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 C11orf1Q9H5F2 150 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 LAMA2P24043 3122 aaKnown RBP8.64□□□□□ -1.03
CLCN6-202ENST00000346436 HIVEP2P31629 2446 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 DLEU1O43261 78 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 Q8TAT8 98 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 IGFBPL1Q8WX77 278 aa8.64□□□□□ -1.03
CLCN6-202ENST00000346436 MRPL16Q9NX20 251 aaKnown RBP8.64□□□□□ -1.03
CLCN6-202ENST00000346436 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 NDUFA11Q86Y39 141 aa8.63□□□□□ -1.03
CLCN6-202ENST00000346436 NRGNQ92686 78 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms