RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 THBDP07204 575 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 TRBV6-1A0A0K0K1D8 114 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 CEND1Q8N111 149 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 IGLL5B9A064 214 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 EVI2AP22794 236 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 ZC2HC1BQ5TFG8 222 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 SVIPQ8NHG7 77 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 FOXC2Q99958 501 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 MSRB1Q9NZV6 116 aa16.79■□□□□ 0.28
TRIM3-201ENST00000345851 IGKV1-17P01599 117 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 CKS1BP61024 79 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 HIGD1BQ9P298 99 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 S4R3C0 116 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 SVEP1Q4LDE5 3571 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 FCER1GP30273 86 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 FOXI2Q6ZQN5 318 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 ITPR1Q14643 2758 aa16.78■□□□□ 0.28
TRIM3-201ENST00000345851 ANKHD1Q8IWZ3 2542 aaKnown RBP16.77■□□□□ 0.28
TRIM3-201ENST00000345851 F8W1H4 67 aa16.77■□□□□ 0.28
TRIM3-201ENST00000345851 E9PLD3 99 aa16.77■□□□□ 0.27
TRIM3-201ENST00000345851 IGKCP01834 107 aa16.77■□□□□ 0.27
TRIM3-201ENST00000345851 SHANK2-AS3Q9BTD1 123 aa16.76■□□□□ 0.27
TRIM3-201ENST00000345851 TMEM160Q9NX00 188 aa16.76■□□□□ 0.27
TRIM3-201ENST00000345851 IGKV2-40A0A087WW87 121 aaPredicted RBP16.76■□□□□ 0.27
TRIM3-201ENST00000345851 IGKV2D-40P01614 121 aaPredicted RBP16.76■□□□□ 0.27
TRIM3-201ENST00000345851 TEX36Q5VZQ5 186 aa16.76■□□□□ 0.27
TRIM3-201ENST00000345851 GRNP28799 593 aaKnown RBP16.75■□□□□ 0.27
TRIM3-201ENST00000345851 PVRIGQ6DKI7 326 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 LYPD2Q6UXB3 125 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 LCNL1Q6ZST4 164 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 SPATA25Q9BR10 227 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 SPTAN1Q13813 2472 aaKnown RBP16.75■□□□□ 0.27
TRIM3-201ENST00000345851 IL4P05112 153 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 Q8TAT8 98 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 MAP1LC3AQ9H492 121 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 RALYQ9UKM9 306 aaKnown RBP16.75■□□□□ 0.27
TRIM3-201ENST00000345851 EGR2P11161 476 aaPredicted RBP16.75■□□□□ 0.27
TRIM3-201ENST00000345851 GATA1P15976 413 aaPredicted RBP16.75■□□□□ 0.27
TRIM3-201ENST00000345851 MC5RP33032 325 aa16.75■□□□□ 0.27
TRIM3-201ENST00000345851 ASH1LQ9NR48 2969 aaKnown RBP16.74■□□□□ 0.27
TRIM3-201ENST00000345851 TMEM8BA6NDV4 472 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 FAM90A27PA6NNH2 459 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 PPIFP30405 207 aaKnown RBP16.74■□□□□ 0.27
TRIM3-201ENST00000345851 MAPKAPK5-AS1Q8N8E1 139 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 TM2D2Q9BX73 214 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 FBXL15Q9H469 300 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 SIGLEC9Q9Y336 463 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 TRAV26-1A0A087WT03 109 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 NPIPB5A8MRT5 1133 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 AKAP6Q13023 2319 aa16.74■□□□□ 0.27
TRIM3-201ENST00000345851 TRAV40A0A0B4J280 105 aa16.73■□□□□ 0.27
TRIM3-201ENST00000345851 TEX22C9J3V5 150 aa16.73■□□□□ 0.27
TRIM3-201ENST00000345851 H3BRN7 92 aa16.73■□□□□ 0.27
TRIM3-201ENST00000345851 I3L2K1 104 aa16.73■□□□□ 0.27
TRIM3-201ENST00000345851 ADIPOQQ15848 244 aa16.73■□□□□ 0.27
TRIM3-201ENST00000345851 LINC01560Q8TB33 94 aa16.73■□□□□ 0.27
TRIM3-201ENST00000345851 CSMD1Q96PZ7 3565 aa16.73■□□□□ 0.27
TRIM3-201ENST00000345851 CDSNQ15517 529 aa16.72■□□□□ 0.27
TRIM3-201ENST00000345851 C12orf74Q32Q52 190 aa16.72■□□□□ 0.27
TRIM3-201ENST00000345851 GAGE13Q4V321 117 aa16.72■□□□□ 0.27
TRIM3-201ENST00000345851 ZMAT4Q9H898 229 aa16.72■□□□□ 0.27
TRIM3-201ENST00000345851 TMEM158Q8WZ71 300 aa16.72■□□□□ 0.27
TRIM3-201ENST00000345851 CCL17Q92583 94 aa16.72■□□□□ 0.27
TRIM3-201ENST00000345851 AAMDCQ9H7C9 122 aa16.72■□□□□ 0.27
TRIM3-201ENST00000345851 SCGB2A2Q13296 93 aa16.71■□□□□ 0.27
TRIM3-201ENST00000345851 PIFOQ8TCI5 191 aa16.71■□□□□ 0.27
TRIM3-201ENST00000345851 HIVEP3Q5T1R4 2406 aa16.71■□□□□ 0.27
TRIM3-201ENST00000345851 DPM2O94777 84 aa16.71■□□□□ 0.27
TRIM3-201ENST00000345851 ZNF80P51504 273 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-201ENST00000345851 LY6DQ14210 128 aa16.71■□□□□ 0.27
TRIM3-201ENST00000345851 KLF17Q5JT82 389 aaPredicted RBP16.71■□□□□ 0.27
TRIM3-201ENST00000345851 PPP1R27Q86WC6 154 aa16.71■□□□□ 0.27
TRIM3-201ENST00000345851 RNF125Q96EQ8 232 aa16.71■□□□□ 0.27
TRIM3-201ENST00000345851 IGFL4Q6B9Z1 124 aa16.71■□□□□ 0.26
TRIM3-201ENST00000345851 C20orf78Q9BR46 151 aa16.71■□□□□ 0.26
TRIM3-201ENST00000345851 PLGLAQ15195 96 aa16.7■□□□□ 0.26
TRIM3-201ENST00000345851 ZNF491Q8N8L2 437 aa16.7■□□□□ 0.26
TRIM3-201ENST00000345851 RNF185Q96GF1 192 aa16.7■□□□□ 0.26
TRIM3-201ENST00000345851 HIST1H4GQ99525 98 aa16.7■□□□□ 0.26
TRIM3-201ENST00000345851 NDUFB3O43676 98 aa16.7■□□□□ 0.26
TRIM3-201ENST00000345851 LINC00311Q8N616 119 aa16.7■□□□□ 0.26
TRIM3-201ENST00000345851 A0A1B0GWB2 263 aa16.69■□□□□ 0.26
TRIM3-201ENST00000345851 TNFRSF6BO95407 300 aa16.69■□□□□ 0.26
TRIM3-201ENST00000345851 LYPD1Q8N2G4 141 aa16.69■□□□□ 0.26
TRIM3-201ENST00000345851 MRPL35Q9NZE8 188 aaKnown RBP16.69■□□□□ 0.26
TRIM3-201ENST00000345851 ORM1P02763 201 aa16.69■□□□□ 0.26
TRIM3-201ENST00000345851 MRPS12O15235 138 aaKnown RBP16.68■□□□□ 0.26
TRIM3-201ENST00000345851 CRYBA4P53673 196 aa16.68■□□□□ 0.26
TRIM3-201ENST00000345851 PKD1L2Q7Z442 2459 aa16.68■□□□□ 0.26
TRIM3-201ENST00000345851 CCL21O00585 134 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 CTSZQ9UBR2 303 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 CRYGBP07316 175 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 PRR25Q96S07 402 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 SHISA9B4DS77 424 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 K7EIM0 57 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 CNIH1O95406 144 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 C3orf36Q3SXR2 165 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 TTC9CQ8N5M4 171 aa16.67■□□□□ 0.26
TRIM3-201ENST00000345851 IGHV1-8P0DP01 117 aa16.66■□□□□ 0.26
TRIM3-201ENST00000345851 VKORC1Q9BQB6 163 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms