RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 IGHV3-23P01764 117 aa13.89□□□□□ -0.19
VHL-202ENST00000345392 PRSS1P07477 247 aa13.89□□□□□ -0.19
VHL-202ENST00000345392 HLA-DMBP28068 263 aa13.89□□□□□ -0.19
VHL-202ENST00000345392 GFRALQ6UXV0 394 aa13.89□□□□□ -0.19
VHL-202ENST00000345392 HHLA3Q9XRX5 114 aa13.89□□□□□ -0.19
VHL-202ENST00000345392 E7EQL1 145 aa13.88□□□□□ -0.19
VHL-202ENST00000345392 GATA1P15976 413 aaPredicted RBP13.88□□□□□ -0.19
VHL-202ENST00000345392 GTSCR1Q86UQ5 136 aa13.88□□□□□ -0.19
VHL-202ENST00000345392 ZNF575Q86XF7 245 aa13.88□□□□□ -0.19
VHL-202ENST00000345392 RALYQ9UKM9 306 aaKnown RBP13.88□□□□□ -0.19
VHL-202ENST00000345392 IGHV3OR16-8A0A075B7F1 116 aa13.88□□□□□ -0.19
VHL-202ENST00000345392 TIMM23O14925 209 aa13.88□□□□□ -0.19
VHL-202ENST00000345392 PPIFP30405 207 aaKnown RBP13.88□□□□□ -0.19
VHL-202ENST00000345392 ODF1Q14990 250 aa13.88□□□□□ -0.19
VHL-202ENST00000345392 ZNF562Q6V9R5 426 aa13.88□□□□□ -0.19
VHL-202ENST00000345392 ORM1P02763 201 aa13.87□□□□□ -0.19
VHL-202ENST00000345392 TNFRSF14Q92956 283 aa13.87□□□□□ -0.19
VHL-202ENST00000345392 RNF185Q96GF1 192 aa13.87□□□□□ -0.19
VHL-202ENST00000345392 CHAC1Q9BUX1 264 aa13.87□□□□□ -0.19
VHL-202ENST00000345392 MAP1LC3AQ9H492 121 aa13.87□□□□□ -0.19
VHL-202ENST00000345392 PDE6HQ13956 83 aa13.87□□□□□ -0.19
VHL-202ENST00000345392 NHP2Q9NX24 153 aaKnown RBP13.87□□□□□ -0.19
VHL-202ENST00000345392 MED13LQ71F56 2210 aa13.86□□□□□ -0.19
VHL-202ENST00000345392 PTPRQQ9UMZ3 2332 aa13.86□□□□□ -0.19
VHL-202ENST00000345392 ZNF207O43670 478 aaKnown RBP13.86□□□□□ -0.19
VHL-202ENST00000345392 PPIAL4CA0A0B4J2A2 164 aa13.86□□□□□ -0.19
VHL-202ENST00000345392 SHISA9B4DS77 424 aa13.86□□□□□ -0.19
VHL-202ENST00000345392 CACNA1AO00555 2505 aa13.86□□□□□ -0.19
VHL-202ENST00000345392 PPIAL4GP0DN37 164 aa13.86□□□□□ -0.19
VHL-202ENST00000345392 FOXC2Q99958 501 aa13.86□□□□□ -0.19
VHL-202ENST00000345392 TRBV25-1A0A075B6N4 114 aa13.85□□□□□ -0.19
VHL-202ENST00000345392 IGLC6P0CF74 106 aa13.85□□□□□ -0.19
VHL-202ENST00000345392 Q8NA96 180 aa13.85□□□□□ -0.19
VHL-202ENST00000345392 IGHV3-35A0A0C4DH35 117 aa13.85□□□□□ -0.19
VHL-202ENST00000345392 LY6HO94772 140 aa13.85□□□□□ -0.19
VHL-202ENST00000345392 TNFRSF6BO95407 300 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 IGKCP01834 107 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 ZC2HC1BQ5TFG8 222 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 IGF2-ASQ6U949 168 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 FCER1GP30273 86 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 TMEM158Q8WZ71 300 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 GTSF1LQ9H1H1 148 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 ZMAT4Q9H898 229 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 MSRB2Q9Y3D2 182 aa13.84□□□□□ -0.19
VHL-202ENST00000345392 SMIM17P0DL12 118 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 PHLDA1Q8WV24 401 aaPredicted RBP13.83□□□□□ -0.2
VHL-202ENST00000345392 TMEM160Q9NX00 188 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 ANKHD1Q8IWZ3 2542 aaKnown RBP13.83□□□□□ -0.2
VHL-202ENST00000345392 TMEM8BA6NDV4 472 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 F8W735 103 aaPredicted RBP13.83□□□□□ -0.2
VHL-202ENST00000345392 BMI1P35226 326 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 ERCC8Q13216 396 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 SAMD13Q5VXD3 122 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 FANCD2OSQ96PS1 177 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 ONECUT1Q9UBC0 465 aa13.83□□□□□ -0.2
VHL-202ENST00000345392 IGHG4P01861 327 aa13.82□□□□□ -0.2
VHL-202ENST00000345392 RAXQ9Y2V3 346 aa13.82□□□□□ -0.2
VHL-202ENST00000345392 AGRNO00468 2067 aa13.82□□□□□ -0.2
VHL-202ENST00000345392 TRAV40A0A0B4J280 105 aa13.82□□□□□ -0.2
VHL-202ENST00000345392 NBR2O15453 112 aa13.82□□□□□ -0.2
VHL-202ENST00000345392 HIGD1BQ9P298 99 aa13.82□□□□□ -0.2
VHL-202ENST00000345392 SMAD5-AS1Q9Y6J3 95 aa13.82□□□□□ -0.2
VHL-202ENST00000345392 LY6LH3BQJ8 138 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 MFAP4P55083 255 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 HES1Q14469 280 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 LINC01560Q8TB33 94 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 TMEM190Q8WZ59 177 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 RAB1BQ9H0U4 201 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 ZFHX3Q15911 3703 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 VSTM5A8MXK1 200 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 GRNP28799 593 aaKnown RBP13.81□□□□□ -0.2
VHL-202ENST00000345392 WFDC2Q14508 124 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 PIFOQ8TCI5 191 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 SRSF8Q9BRL6 282 aaKnown RBP13.81□□□□□ -0.2
VHL-202ENST00000345392 CACNA1BQ00975 2339 aa13.81□□□□□ -0.2
VHL-202ENST00000345392 ACACBO00763 2458 aa13.8□□□□□ -0.2
VHL-202ENST00000345392 AZU1P20160 251 aa13.8□□□□□ -0.2
VHL-202ENST00000345392 COX8CQ7Z4L0 72 aa13.8□□□□□ -0.2
VHL-202ENST00000345392 CEND1Q8N111 149 aa13.8□□□□□ -0.2
VHL-202ENST00000345392 MAPKAPK5-AS1Q8N8E1 139 aa13.8□□□□□ -0.2
VHL-202ENST00000345392 HRNRQ86YZ3 2850 aaPredicted RBP13.8□□□□□ -0.2
VHL-202ENST00000345392 ATRXP46100 2492 aa13.8□□□□□ -0.2
VHL-202ENST00000345392 RPL7P18124 248 aaKnown RBP13.8□□□□□ -0.2
VHL-202ENST00000345392 SMAGPQ0VAQ4 97 aa13.8□□□□□ -0.2
VHL-202ENST00000345392 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
VHL-202ENST00000345392 PRAC2D3DTV9 90 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 CEACAM3P40198 252 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 DTX2Q86UW9 622 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 MTURNQ8N3F0 131 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 RNF5Q99942 180 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 NXT2Q9NPJ8 142 aaKnown RBP13.79□□□□□ -0.2
VHL-202ENST00000345392 DPM2O94777 84 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 S100A7AQ86SG5 101 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 DYNAPQ8N1N2 210 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 C21orf62Q9NYP8 219 aa13.79□□□□□ -0.2
VHL-202ENST00000345392 MRPL35Q9NZE8 188 aaKnown RBP13.79□□□□□ -0.2
VHL-202ENST00000345392 IGLV11-55A0A075B6I3 123 aa13.78□□□□□ -0.2
VHL-202ENST00000345392 TMEM11P17152 192 aa13.78□□□□□ -0.2
VHL-202ENST00000345392 TRAV26-2A0A0B4J265 109 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms