RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 FHITP49789 147 aa8.66□□□□□ -1.02
SNCA-202ENST00000345009 SULT1A2P50226 295 aa8.66□□□□□ -1.02
SNCA-202ENST00000345009 NKX2-5P52952 324 aaPredicted RBP8.66□□□□□ -1.02
SNCA-202ENST00000345009 FGF8P55075 233 aaPredicted RBP8.66□□□□□ -1.02
SNCA-202ENST00000345009 RARRES2Q99969 163 aa8.66□□□□□ -1.02
SNCA-202ENST00000345009 OVOL2Q9BRP0 275 aa8.66□□□□□ -1.02
SNCA-202ENST00000345009 GOLT1BQ9Y3E0 138 aa8.66□□□□□ -1.02
SNCA-202ENST00000345009 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 PRAC2D3DTV9 90 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 NPIPB6E9PJ23 425 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 BOLA2-SMG1P6H3BVE0 249 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 IFNA7P01567 189 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 HBE1P02100 147 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 SLC25A5P05141 298 aaKnown RBP8.65□□□□□ -1.02
SNCA-202ENST00000345009 LEPP41159 167 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 CDKN1BP46527 198 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 C9orf47Q6ZRZ4 202 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 C5orf17Q8NAS9 161 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 OR11H2Q8NH07 326 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 ODF3Q96PU9 254 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 TMEM208Q9BTX3 173 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 SLC35B3Q9H1N7 401 aa8.65□□□□□ -1.02
SNCA-202ENST00000345009 DIRC3C9JPN6 131 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 F6UZH7 168 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 INSP01308 110 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 NMBP08949 121 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 GIG44P09565 113 aaPredicted RBP8.64□□□□□ -1.03
SNCA-202ENST00000345009 FXYD7P58549 80 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 SUMO1P63165 101 aaKnown RBP8.64□□□□□ -1.03
SNCA-202ENST00000345009 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 AMTNQ6UX39 209 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 SSX7Q7RTT5 188 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 IGF2BP2-AS1Q96M15 143 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 RETNQ9HD89 108 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 ARL2-SNX15V9GYD0 113 aa8.64□□□□□ -1.03
SNCA-202ENST00000345009 TENM3Q9P273 2699 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 TRAV1-1A0A0B4J248 108 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 TRBV7-9A0A0J9YWB2 115 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 SMIM9A6NGZ8 99 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 FBLL1A6NHQ2 334 aaKnown RBP8.63□□□□□ -1.03
SNCA-202ENST00000345009 ZNF705EA8MWA4 302 aaPredicted RBP8.63□□□□□ -1.03
SNCA-202ENST00000345009 ZNF138P52744 262 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 UBE2G2P60604 165 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 BLOC1S1P78537 153 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 CST9LP1Q5W188 147 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 TMEM256Q8N2U0 113 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 AGPAT4-IT1Q9H0P7 198 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 TMPRSS5Q9H3S3 457 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 RPH3ALQ9UNE2 315 aa8.63□□□□□ -1.03
SNCA-202ENST00000345009 IGKV2-40A0A087WW87 121 aaPredicted RBP8.62□□□□□ -1.03
SNCA-202ENST00000345009 M0R2Z0 102 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 IGKV2D-40P01614 121 aaPredicted RBP8.62□□□□□ -1.03
SNCA-202ENST00000345009 CT45A10P0DMU9 189 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 MIFP14174 115 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 GOLT1AQ6ZVE7 132 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 CSNK1G2-AS1Q8NCQ2 148 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 IL17DQ8TAD2 202 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 HIST1H2BAQ96A08 127 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 VGLL1Q99990 258 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 C20orf144Q9BQM9 153 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 EPDR1Q9UM22 224 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 LENEPQ9Y5L5 61 aa8.62□□□□□ -1.03
SNCA-202ENST00000345009 IGHV3OR16-12A0A075B7B8 117 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 A0A1B0GV50 99 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 FAM74A7A6NL05 159 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 IFNA1P01562 189 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 TCRAP04437 139 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 GPX1P07203 203 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 ERCC8Q13216 396 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 ZNF705AQ6ZN79 300 aaPredicted RBP8.61□□□□□ -1.03
SNCA-202ENST00000345009 CYB561D1Q8N8Q1 229 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 WWC2-AS2Q96NR7 200 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 LINC01587Q99440 93 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 NEU1Q99519 415 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 NIPSNAP3BQ9BS92 247 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 ATG101Q9BSB4 218 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 NDFIP1Q9BT67 221 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 MANBALQ9NQG1 85 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 ZNF492Q9P255 531 aa8.61□□□□□ -1.03
SNCA-202ENST00000345009 TRAV12-2A0A075B6T6 113 aa8.6□□□□□ -1.03
SNCA-202ENST00000345009 TMEM189A5PLL7 270 aa8.6□□□□□ -1.03
SNCA-202ENST00000345009 GGTLC3B5MD39 225 aa8.6□□□□□ -1.03
SNCA-202ENST00000345009 H7BYZ3 331 aa8.6□□□□□ -1.03
SNCA-202ENST00000345009 PRB4P10163 310 aaPredicted RBP8.6□□□□□ -1.03
SNCA-202ENST00000345009 CRISP2P16562 243 aa8.6□□□□□ -1.03
SNCA-202ENST00000345009 TXNDC17Q9BRA2 123 aa8.6□□□□□ -1.03
SNCA-202ENST00000345009 YTHDF2Q9Y5A9 579 aaKnown RBP8.6□□□□□ -1.03
SNCA-202ENST00000345009 DNAH9Q9NYC9 4486 aa8.59□□□□□ -1.03
SNCA-202ENST00000345009 PAGE4O60829 102 aa8.59□□□□□ -1.03
SNCA-202ENST00000345009 RNASE4P34096 147 aaKnown RBP8.59□□□□□ -1.03
SNCA-202ENST00000345009 TAGLN2P37802 199 aaKnown RBP8.59□□□□□ -1.03
SNCA-202ENST00000345009 RRN3P1Q2M238 152 aa8.59□□□□□ -1.03
SNCA-202ENST00000345009 SAPCD1Q5SSQ6 148 aa8.59□□□□□ -1.03
SNCA-202ENST00000345009 CCDC28AQ8IWP9 274 aa8.59□□□□□ -1.03
SNCA-202ENST00000345009 GNG13Q9P2W3 67 aa8.59□□□□□ -1.03
SNCA-202ENST00000345009 C7orf71A4D174 169 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 KLLNB2CW77 178 aa8.58□□□□□ -1.04
SNCA-202ENST00000345009 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms