RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 FAM19A4Q96LR4 140 aa10.18□□□□□ -0.78
HMGN3-202ENST00000344726 C20orf144Q9BQM9 153 aa10.18□□□□□ -0.78
HMGN3-202ENST00000344726 PAXXQ9BUH6 204 aa10.18□□□□□ -0.78
HMGN3-202ENST00000344726 AGPAT4-IT1Q9H0P7 198 aa10.18□□□□□ -0.78
HMGN3-202ENST00000344726 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
HMGN3-202ENST00000344726 PKD1P98161 4303 aa10.17□□□□□ -0.78
HMGN3-202ENST00000344726 IGKV2-40A0A087WW87 121 aaPredicted RBP10.17□□□□□ -0.78
HMGN3-202ENST00000344726 TRAV12-3A0A0B4J271 114 aa10.17□□□□□ -0.78
HMGN3-202ENST00000344726 IGKV2D-40P01614 121 aaPredicted RBP10.17□□□□□ -0.78
HMGN3-202ENST00000344726 LEPP41159 167 aa10.17□□□□□ -0.78
HMGN3-202ENST00000344726 FAM122CQ6P4D5 195 aa10.17□□□□□ -0.78
HMGN3-202ENST00000344726 TMEM263Q8WUH6 116 aaKnown RBP10.17□□□□□ -0.78
HMGN3-202ENST00000344726 RNF141Q8WVD5 230 aa10.17□□□□□ -0.78
HMGN3-202ENST00000344726 DNAH11Q96DT5 4516 aa10.17□□□□□ -0.78
HMGN3-202ENST00000344726 IFNA5P01569 189 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 P0DMU3 169 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 ZNF493Q6ZR52 646 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 POM121L12Q8N7R1 296 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 SCGB1C1Q8TD33 95 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 VGLL1Q99990 258 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 AAMDCQ9H7C9 122 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 NOP10Q9NPE3 64 aaKnown RBP10.16□□□□□ -0.78
HMGN3-202ENST00000344726 TIMM8BQ9Y5J9 83 aaPredicted RBP10.16□□□□□ -0.78
HMGN3-202ENST00000344726 PKHD1P08F94 4074 aa10.16□□□□□ -0.78
HMGN3-202ENST00000344726 KLLNB2CW77 178 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 OR7C2O60412 319 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 CD300CQ08708 224 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 BTN1A1Q13410 526 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 Q5BKY6 102 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 C9orf47Q6ZRZ4 202 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 MED28Q9H204 178 aa10.15□□□□□ -0.78
HMGN3-202ENST00000344726 C7orf71A4D174 169 aa10.14□□□□□ -0.79
HMGN3-202ENST00000344726 ZNF324O75467 553 aaPredicted RBP10.14□□□□□ -0.79
HMGN3-202ENST00000344726 SLC25A5P05141 298 aaKnown RBP10.14□□□□□ -0.79
HMGN3-202ENST00000344726 PRR9Q5T870 116 aa10.14□□□□□ -0.79
HMGN3-202ENST00000344726 Q6ZQT7 251 aa10.14□□□□□ -0.79
HMGN3-202ENST00000344726 MUC4Q99102 2169 aa10.14□□□□□ -0.79
HMGN3-202ENST00000344726 CBY3A6NI87 242 aa10.13□□□□□ -0.79
HMGN3-202ENST00000344726 CRISP2P16562 243 aa10.13□□□□□ -0.79
HMGN3-202ENST00000344726 RAB2AP61019 212 aa10.13□□□□□ -0.79
HMGN3-202ENST00000344726 RANP62826 216 aaKnown RBP10.13□□□□□ -0.79
HMGN3-202ENST00000344726 UBE2L3P68036 154 aaKnown RBP10.13□□□□□ -0.79
HMGN3-202ENST00000344726 ZFAND2AQ8N6M9 145 aa10.13□□□□□ -0.79
HMGN3-202ENST00000344726 LINC00612Q8N6U2 182 aa10.13□□□□□ -0.79
HMGN3-202ENST00000344726 PYGO2Q9BRQ0 406 aa10.13□□□□□ -0.79
HMGN3-202ENST00000344726 Q9H3A6 140 aa10.13□□□□□ -0.79
HMGN3-202ENST00000344726 F5H768 121 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 M0R2N4 97 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 RTL8CO15255 209 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 ATP5G1P05496 136 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 RNASE4P34096 147 aaKnown RBP10.12□□□□□ -0.79
HMGN3-202ENST00000344726 ATP5G3P48201 142 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 KHDC3LQ587J8 217 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 CCDC28AQ8IWP9 274 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 Q8TAT8 98 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 AQP10Q96PS8 301 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 ZNF492Q9P255 531 aa10.12□□□□□ -0.79
HMGN3-202ENST00000344726 A0A1B0GVY2 172 aa10.11□□□□□ -0.79
HMGN3-202ENST00000344726 M6PRP20645 277 aa10.11□□□□□ -0.79
HMGN3-202ENST00000344726 TMEM78Q5T7P6 136 aa10.11□□□□□ -0.79
HMGN3-202ENST00000344726 LYPD1Q8N2G4 141 aa10.11□□□□□ -0.79
HMGN3-202ENST00000344726 C15orf53Q8NAA6 179 aa10.11□□□□□ -0.79
HMGN3-202ENST00000344726 C11orf72Q8NBR9 251 aa10.11□□□□□ -0.79
HMGN3-202ENST00000344726 PCLOQ9Y6V0 5065 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 IGLV2-18A0A075B6J9 118 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 GAGE12BA1L429 117 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 SNURFLB1AK76 121 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 GAGE7O76087 117 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 GPX1P07203 203 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 NMBP08949 121 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 GIPP09681 153 aaPredicted RBP10.1□□□□□ -0.79
HMGN3-202ENST00000344726 GAGE12FP0CL80 117 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 GAGE12GP0CL81 117 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 GAGE12IP0CL82 117 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 ZNF138P52744 262 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 TAS2R45P59539 299 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 ACOT6Q3I5F7 207 aaPredicted RBP10.1□□□□□ -0.79
HMGN3-202ENST00000344726 UBE2DNLQ8IWF7 75 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 LINC00467Q9BRT7 94 aa10.1□□□□□ -0.79
HMGN3-202ENST00000344726 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 DIRC3C9JPN6 131 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 HMGB3O15347 200 aaKnown RBP10.09□□□□□ -0.79
HMGN3-202ENST00000344726 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
HMGN3-202ENST00000344726 RNF212Q495C1 297 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 Q6ZR54 194 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 Q6ZTI0 123 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 EIF4E3Q8N5X7 224 aaKnown RBP10.09□□□□□ -0.79
HMGN3-202ENST00000344726 OR10G4Q8NGN3 311 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 OR10G9Q8NGN4 311 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 OR10G7Q8NGN6 311 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 OR2G3Q8NGZ4 309 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 TP53TG3Q9ULZ0 132 aa10.09□□□□□ -0.79
HMGN3-202ENST00000344726 RBAKDNA6NC62 111 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 G3V3Q6 166 aa10.08□□□□□ -0.8
HMGN3-202ENST00000344726 HOXA5P20719 270 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms