RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ZNF471Q9BX82 626 aaPredicted RBP11.46□□□□□ -0.57
ATG4B-201ENST00000344376 SMIM3Q9BZL3 60 aa11.46□□□□□ -0.57
ATG4B-201ENST00000344376 LYRM9A8MSI8 78 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 NPIPB6E9PJ23 425 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 H7BYZ3 331 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 TPT1P13693 172 aaKnown RBP11.45□□□□□ -0.58
ATG4B-201ENST00000344376 HTN1P15515 57 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 HTN3P15516 51 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 MIR17HGQ75NE6 70 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 FAM210BQ96KR6 192 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 ODF3Q96PU9 254 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 FUT9Q9Y231 359 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 NMBP08949 121 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 FFAR4Q5NUL3 377 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 ALKAL2Q6UX46 152 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 C16orf74Q96GX8 76 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 PAXXQ9BUH6 204 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 OR51M1Q9H341 326 aa11.45□□□□□ -0.58
ATG4B-201ENST00000344376 NDUFB4O95168 129 aa11.44□□□□□ -0.58
ATG4B-201ENST00000344376 FAM167A-AS1Q96KT0 104 aa11.44□□□□□ -0.58
ATG4B-201ENST00000344376 PLA2G2EQ9NZK7 142 aa11.44□□□□□ -0.58
ATG4B-201ENST00000344376 M0R3E3 92 aa11.43□□□□□ -0.58
ATG4B-201ENST00000344376 OR7C2O60412 319 aa11.43□□□□□ -0.58
ATG4B-201ENST00000344376 PRM2P04554 102 aa11.43□□□□□ -0.58
ATG4B-201ENST00000344376 NBEAP1P0C6P0 100 aa11.43□□□□□ -0.58
ATG4B-201ENST00000344376 GFI1BQ5VTD9 330 aa11.43□□□□□ -0.58
ATG4B-201ENST00000344376 EIF5AL1Q6IS14 154 aaKnown RBP11.43□□□□□ -0.58
ATG4B-201ENST00000344376 ZNF493Q6ZR52 646 aa11.43□□□□□ -0.58
ATG4B-201ENST00000344376 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
ATG4B-201ENST00000344376 PARD6GQ9BYG4 376 aaPredicted RBP11.43□□□□□ -0.58
ATG4B-201ENST00000344376 P0DMU3 169 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 FAM231AP0DMU4 169 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 FAM231CP0DMU5 169 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 CT45A10P0DMU9 189 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 AZU1P20160 251 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 TAS2R45P59539 299 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 TMEM263Q8WUH6 116 aaKnown RBP11.42□□□□□ -0.58
ATG4B-201ENST00000344376 RNF141Q8WVD5 230 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 CYTL1Q9NRR1 136 aa11.42□□□□□ -0.58
ATG4B-201ENST00000344376 J3KRW8 73 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 OR10J4P0C629 311 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 DEFB130BP0DP73 79 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 DEFB130AP0DP74 79 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 ICAM4Q14773 271 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 KHDC3LQ587J8 217 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 LINC00477Q96M19 166 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 TIMM8BQ9Y5J9 83 aaPredicted RBP11.41□□□□□ -0.58
ATG4B-201ENST00000344376 SLC25A5P05141 298 aaKnown RBP11.41□□□□□ -0.58
ATG4B-201ENST00000344376 UBE2L3P68036 154 aaKnown RBP11.41□□□□□ -0.58
ATG4B-201ENST00000344376 KIR3DS1Q14943 382 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 EIF4E3Q8N5X7 224 aaKnown RBP11.41□□□□□ -0.58
ATG4B-201ENST00000344376 FXYD5Q96DB9 178 aa11.41□□□□□ -0.58
ATG4B-201ENST00000344376 PLAC8L1A1L4L8 177 aa11.4□□□□□ -0.58
ATG4B-201ENST00000344376 CSN1S1P47710 185 aa11.4□□□□□ -0.58
ATG4B-201ENST00000344376 ERCC8Q13216 396 aa11.4□□□□□ -0.58
ATG4B-201ENST00000344376 ZNF266Q14584 549 aa11.4□□□□□ -0.58
ATG4B-201ENST00000344376 ACOT6Q3I5F7 207 aaPredicted RBP11.4□□□□□ -0.58
ATG4B-201ENST00000344376 TMEM78Q5T7P6 136 aa11.4□□□□□ -0.58
ATG4B-201ENST00000344376 RNASE8Q8TDE3 154 aaKnown RBP11.4□□□□□ -0.58
ATG4B-201ENST00000344376 WFDC1Q9HC57 220 aa11.4□□□□□ -0.58
ATG4B-201ENST00000344376 KMT2AQ03164 3969 aa11.39□□□□□ -0.59
ATG4B-201ENST00000344376 TRAV12-3A0A0B4J271 114 aa11.39□□□□□ -0.59
ATG4B-201ENST00000344376 SMUG1Q53HV7 270 aa11.39□□□□□ -0.59
ATG4B-201ENST00000344376 PYGO2Q9BRQ0 406 aa11.39□□□□□ -0.59
ATG4B-201ENST00000344376 C7orf71A4D174 169 aa11.38□□□□□ -0.59
ATG4B-201ENST00000344376 KRBOX1C9JBD0 128 aa11.38□□□□□ -0.59
ATG4B-201ENST00000344376 TMEM88Q6PEY1 159 aa11.38□□□□□ -0.59
ATG4B-201ENST00000344376 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
ATG4B-201ENST00000344376 LYPD1Q8N2G4 141 aa11.38□□□□□ -0.59
ATG4B-201ENST00000344376 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
ATG4B-201ENST00000344376 AGPAT4-IT1Q9H0P7 198 aa11.38□□□□□ -0.59
ATG4B-201ENST00000344376 NOP10Q9NPE3 64 aaKnown RBP11.38□□□□□ -0.59
ATG4B-201ENST00000344376 EPPK1P58107 5090 aaKnown RBP11.37□□□□□ -0.59
ATG4B-201ENST00000344376 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-201ENST00000344376 A0A1W2PPV4 95 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 SNURFLB1AK76 121 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 IGKV2D-40P01614 121 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-201ENST00000344376 ATP5G1P05496 136 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 ATP5G3P48201 142 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 RANP62826 216 aaKnown RBP11.37□□□□□ -0.59
ATG4B-201ENST00000344376 UBE2DNLQ8IWF7 75 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 BORCS7-ASMTA0A0B4J1R7 106 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 CBY3A6NI87 242 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 KLLNB2CW77 178 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 F5H768 121 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 GPX1P07203 203 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 C15orf53Q8NAA6 179 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 PCNPQ8WW12 178 aaKnown RBP11.37□□□□□ -0.59
ATG4B-201ENST00000344376 FAM19A4Q96LR4 140 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 Q9H3A6 140 aa11.37□□□□□ -0.59
ATG4B-201ENST00000344376 SCO1O75880 301 aa11.36□□□□□ -0.59
ATG4B-201ENST00000344376 CRISP2P16562 243 aa11.36□□□□□ -0.59
ATG4B-201ENST00000344376 PQLC2Q6ZP29 291 aa11.36□□□□□ -0.59
ATG4B-201ENST00000344376 ZNF503Q96F45 646 aa11.36□□□□□ -0.59
ATG4B-201ENST00000344376 VGLL1Q99990 258 aa11.36□□□□□ -0.59
ATG4B-201ENST00000344376 RNASE4P34096 147 aaKnown RBP11.35□□□□□ -0.59
ATG4B-201ENST00000344376 FAM74A1Q5RGS3 127 aa11.35□□□□□ -0.59
ATG4B-201ENST00000344376 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
ATG4B-201ENST00000344376 HSD17B11Q8NBQ5 300 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms