RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ZNF32P17041 273 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 G6PCP35575 357 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 ERVK11-1P61568 191 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 RPL31P62899 125 aaKnown RBP5.72□□□□□ -1.49
ZNF540-202ENST00000343599 CFHR3Q02985 330 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 POU2AF1Q16633 256 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 IL1F10Q8WWZ1 152 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 ADTRPQ96IZ2 230 aa5.72□□□□□ -1.49
ZNF540-202ENST00000343599 H3BMG7 143 aa5.71□□□□□ -1.49
ZNF540-202ENST00000343599 HOXA3O43365 443 aaPredicted RBP5.71□□□□□ -1.49
ZNF540-202ENST00000343599 TAS2R45P59539 299 aa5.71□□□□□ -1.49
ZNF540-202ENST00000343599 SLC35B1P78383 322 aa5.71□□□□□ -1.49
ZNF540-202ENST00000343599 GATSQ8NAP1 163 aa5.71□□□□□ -1.49
ZNF540-202ENST00000343599 PRELID3AQ96N28 172 aa5.71□□□□□ -1.49
ZNF540-202ENST00000343599 YTHDF2Q9Y5A9 579 aaKnown RBP5.71□□□□□ -1.49
ZNF540-202ENST00000343599 PMS2P5A8MQ11 134 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 NPIPB11E5RHQ5 1161 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 TIMM8AO60220 97 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-202ENST00000343599 FCN3O75636 299 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 SPANXN5Q5MJ07 72 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 OSR2Q8N2R0 312 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 TM2D3Q9BRN9 247 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 FAM90A10PA6NDY2 464 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 IGLL5B9A064 214 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 PGLYRP1O75594 196 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-202ENST00000343599 MGST1P10620 155 aaKnown RBP5.71□□□□□ -1.5
ZNF540-202ENST00000343599 Q6Q795 121 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 Q71RC1 249 aaPredicted RBP5.71□□□□□ -1.5
ZNF540-202ENST00000343599 RNASE7Q9H1E1 156 aaKnown RBP5.71□□□□□ -1.5
ZNF540-202ENST00000343599 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 HIGD1BQ9P298 99 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 CACNG5Q9UF02 275 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 SIGLEC9Q9Y336 463 aa5.71□□□□□ -1.5
ZNF540-202ENST00000343599 KNL1Q8NG31 2342 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 DNAJC13O75165 2243 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 NDUFB3O43676 98 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 IGF1P05019 195 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 PSG5Q15238 335 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 NFE4Q86UQ8 179 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 C11orf53Q8IXP5 236 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 C19orf73Q9NVV2 129 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 C15orf65H3BRN8 121 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 SLC25A5P05141 298 aaKnown RBP5.7□□□□□ -1.5
ZNF540-202ENST00000343599 ARL14EPLP0DKL9 152 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 EVI2AP22794 236 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 MPV17P39210 176 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 CENPWQ5EE01 88 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 ATP5L2Q7Z4Y8 100 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 RPEQ96AT9 228 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 U3KQK5 164 aa5.7□□□□□ -1.5
ZNF540-202ENST00000343599 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 C17orf51A8MQB3 221 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 DEFA4P12838 97 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 IFITM1P13164 125 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 FGF12P61328 243 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 FXYD3Q14802 87 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 Q8N6K4 173 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 PIFOQ8TCI5 191 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 IGKV1D-13A0A0B4J2D9 117 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 A0A1B0GXF2 115 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 RRHO14718 337 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 PSPNO60542 156 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 PDCD6O75340 191 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 IGKV1-39P01597 117 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 IGKV1D-39P04432 117 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 IGKV1-13P0DP09 117 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 C19orf54Q5BKX5 351 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 OR9G1Q8NH87 305 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 C4orf3Q8WVX3 66 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 ITLN1Q8WWA0 313 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 GAFA1Q96PS6 74 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 MDFICQ9P1T7 246 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 DUSP13Q9UII6 198 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 SVILO95425 2214 aa5.69□□□□□ -1.5
ZNF540-202ENST00000343599 TEX50A0A1B0GTY4 177 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 MOSP00540 346 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 IGKV1-5P01602 117 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 IGLV2-8P01709 118 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 FXYD2P54710 66 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 RTL8BQ17RB0 113 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 IBA57Q5T440 356 aaKnown RBP5.68□□□□□ -1.5
ZNF540-202ENST00000343599 CFAP126Q5VTH2 177 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 DRAM1Q8N682 238 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 IDI2-AS1Q9NZ38 188 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 DIDO1Q9BTC0 2240 aaKnown RBP5.68□□□□□ -1.5
ZNF540-202ENST00000343599 ASPMQ8IZT6 3477 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 IGKV1D-43A0A0B4J1Z2 117 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 IZUMO4Q1ZYL8 232 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 LYZL4Q96KX0 146 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 GPHA2Q96T91 129 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 CCL28Q9NRJ3 127 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 TMEM262E9PQX1 116 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 SMCPP49901 116 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-202ENST00000343599 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-202ENST00000343599 LINC00322Q6ZN03 302 aaPredicted RBP5.68□□□□□ -1.5
ZNF540-202ENST00000343599 FAM231DQ6ZW35 169 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 VMO1Q7Z5L0 202 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 STHQ8IWL8 128 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 PPDPFLQ8WWR9 84 aa5.68□□□□□ -1.5
ZNF540-202ENST00000343599 MRPL32Q9BYC8 188 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms