RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 ZNF415Q09FC8 603 aa12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 MRPL16Q9NX20 251 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 V9GYV3 84 aa12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 CENPVL3A0A0U1RRI6 287 aa12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 TMEM213A2RRL7 107 aa12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 LINC01549A6NIU2 74 aa12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
CARMIL3-201ENST00000342740 RITA1Q96K30 269 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 UTRNP46939 3433 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 PTPRSQ13332 1948 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 IGHV4-30-2A0A087WSY4 118 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 A0A1B0GUS0 222 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 OR13C6PQ8NH95 151 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 C5orf30Q96GV9 206 aa12.35□□□□□ -0.43
CARMIL3-201ENST00000342740 ABCA2Q9BZC7 2435 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 A0A087WWL8 130 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 VCYO14598 125 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 TYMSP04818 313 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 Q0VG73 95 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 DEFB112Q30KQ8 113 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 CD300EQ496F6 205 aaPredicted RBP12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 SMPXQ9UHP9 88 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 HIVEP3Q5T1R4 2406 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 INSP01308 110 aa12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 ANKRD11Q6UB99 2663 aaPredicted RBP12.34□□□□□ -0.43
CARMIL3-201ENST00000342740 IGLV1-47P01700 117 aa12.33□□□□□ -0.43
CARMIL3-201ENST00000342740 IGHV4-59P01825 116 aa12.33□□□□□ -0.43
CARMIL3-201ENST00000342740 TCTEX1D4Q5JR98 221 aa12.33□□□□□ -0.43
CARMIL3-201ENST00000342740 CHCHD5Q9BSY4 110 aa12.33□□□□□ -0.43
CARMIL3-201ENST00000342740 LINC01619G3V211 115 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 SPINK13Q1W4C9 94 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 CRIP3Q6Q6R5 217 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 C18orf32Q8TCD1 76 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 CSTL1Q9H114 145 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 MS4A6AQ9H2W1 248 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 RNF114Q9Y508 228 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 CEP192Q8TEP8 1941 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 NAV3Q8IVL0 2385 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 OR2K2Q8NGT1 345 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 TMEM158Q8WZ71 300 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 C17orf77Q96MU5 243 aa12.33□□□□□ -0.44
CARMIL3-201ENST00000342740 SYS1-DBNDD2H3BUS1 97 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 C22orf34Q6ZV56 151 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 C1QTNF4Q9BXJ3 329 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 ALPK3Q96L96 1907 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 IGHV7-81A0A0B4J1V7 117 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 A8MWP6 167 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 HOXA3O43365 443 aaPredicted RBP12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 IGHV3-53P01767 116 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 RPL36AP83881 106 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 RPL36ALQ969Q0 106 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 DTX2Q86UW9 622 aa12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 NHP2Q9NX24 153 aaKnown RBP12.32□□□□□ -0.44
CARMIL3-201ENST00000342740 TNFRSF6BO95407 300 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 ELANEP08246 267 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 ASPHD1Q5U4P2 390 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 PRSS46E5RG02 174 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 IGKV1-17P01599 117 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 FAM104BQ5XKR9 115 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 ZNF815PA8K554 130 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 IGHV4-38-2P0DP08 117 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 NPBQ8NG41 125 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 VGLL1Q99990 258 aa12.31□□□□□ -0.44
CARMIL3-201ENST00000342740 hDV102S1A0JD36 115 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 K7EIM0 57 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 Q6ZPA2 131 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 ZC2HC1AQ96GY0 325 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 MCRIP2Q9BUT9 160 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 C10orf105Q8TEF2 133 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 NRGNQ92686 78 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 RIPPLY3P57055 190 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 NCKAP5O14513 1909 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 SLAQ13239 276 aa12.3□□□□□ -0.44
CARMIL3-201ENST00000342740 I3L2K1 104 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 ZFP36P26651 326 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 LINC00469Q8N7U9 141 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 SPOCK3Q9BQ16 436 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 KLF2Q9Y5W3 355 aaPredicted RBP12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 IGHV7-4-1A0A0J9YVY3 117 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 SMIM27A0A1W2PRY6 76 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 H3BUT2 72 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 Q8N7P7 452 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 PRADC1Q9BSG0 188 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 VPREB3Q9UKI3 123 aa12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 MRPS16Q9Y3D3 137 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-201ENST00000342740 CHD3Q12873 2000 aaKnown RBP12.28□□□□□ -0.44
CARMIL3-201ENST00000342740 ADARB2-AS1A8MUL3 147 aa12.28□□□□□ -0.44
CARMIL3-201ENST00000342740 H3BUA1 57 aa12.28□□□□□ -0.44
CARMIL3-201ENST00000342740 BLCAPP62952 87 aa12.28□□□□□ -0.44
CARMIL3-201ENST00000342740 IGHV3-64A0A075B6Q5 118 aa12.28□□□□□ -0.44
CARMIL3-201ENST00000342740 PROP1O75360 226 aa12.28□□□□□ -0.44
CARMIL3-201ENST00000342740 HLA-DMBP28068 263 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms