RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CLEC5AQ9NY25 188 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 UFC1Q9Y3C8 167 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 ITPR2Q14571 2701 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 SOCS3O14543 225 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 SH2D1AO60880 128 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 S100A8P05109 93 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 GDF5OSQ5U4N7 250 aa15.2■□□□□ 0.02
RTN1-202ENST00000342503 UNC79Q9P2D8 2635 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 IGHV4OR15-8A0A075B7B6 117 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 A0A087WW49 117 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 FAM231BA6NCW3 169 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 FAM181BA6NEQ2 426 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 HLA-DQA1P01909 254 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 RPL11P62913 178 aaKnown RBP15.19■□□□□ 0.02
RTN1-202ENST00000342503 FAM162BQ5T6X4 162 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 RBPMS2Q6ZRY4 209 aaKnown RBP15.19■□□□□ 0.02
RTN1-202ENST00000342503 ATP5L2Q7Z4Y8 100 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 NDFIP1Q9BT67 221 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 SELENOKQ9Y6D0 94 aa15.19■□□□□ 0.02
RTN1-202ENST00000342503 A0A1B0GXF2 115 aa15.18■□□□□ 0.02
RTN1-202ENST00000342503 ZNF80P51504 273 aaPredicted RBP15.18■□□□□ 0.02
RTN1-202ENST00000342503 KLHDC1Q8N7A1 406 aa15.18■□□□□ 0.02
RTN1-202ENST00000342503 AGPAT4-IT1Q9H0P7 198 aa15.18■□□□□ 0.02
RTN1-202ENST00000342503 ESM1Q9NQ30 184 aa15.18■□□□□ 0.02
RTN1-202ENST00000342503 Q6ZSV7 163 aa15.17■□□□□ 0.02
RTN1-202ENST00000342503 NRN1Q9NPD7 142 aa15.17■□□□□ 0.02
RTN1-202ENST00000342503 GRIFINA4D1Z8 144 aa15.17■□□□□ 0.02
RTN1-202ENST00000342503 S100A2P29034 98 aa15.17■□□□□ 0.02
RTN1-202ENST00000342503 KIAA1644Q3SXP7 199 aa15.17■□□□□ 0.02
RTN1-202ENST00000342503 IGKV3-7A0A075B6H7 116 aa15.16■□□□□ 0.02
RTN1-202ENST00000342503 A0A1B0GUS0 222 aa15.16■□□□□ 0.02
RTN1-202ENST00000342503 TMEM213A2RRL7 107 aa15.16■□□□□ 0.02
RTN1-202ENST00000342503 APCSP02743 223 aa15.16■□□□□ 0.02
RTN1-202ENST00000342503 CAMPP49913 170 aa15.16■□□□□ 0.02
RTN1-202ENST00000342503 FOXA3P55318 350 aaPredicted RBP15.16■□□□□ 0.02
RTN1-202ENST00000342503 REC114Q7Z4M0 266 aa15.16■□□□□ 0.02
RTN1-202ENST00000342503 ZNF738Q8NE65 137 aa15.16■□□□□ 0.02
RTN1-202ENST00000342503 TLN2Q9Y4G6 2542 aa15.15■□□□□ 0.02
RTN1-202ENST00000342503 TMEM189A5PLL7 270 aa15.15■□□□□ 0.02
RTN1-202ENST00000342503 TMEM78Q5T7P6 136 aa15.15■□□□□ 0.02
RTN1-202ENST00000342503 C9orf47Q6ZRZ4 202 aa15.15■□□□□ 0.02
RTN1-202ENST00000342503 C18orf65Q6ZTR6 163 aa15.15■□□□□ 0.02
RTN1-202ENST00000342503 FABP4P15090 132 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 CRISP2P16562 243 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 BMI1P35226 326 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 ZNF138P52744 262 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 SYNJ2BPP57105 145 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 HBBP68871 147 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 SLAQ13239 276 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 C12orf57Q99622 126 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 ANK3Q12955 4377 aaKnown RBP15.14■□□□□ 0.01
RTN1-202ENST00000342503 TMSB15BA0A087X1C1 80 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 SRD5A1P18405 259 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 HOXD3P31249 432 aaPredicted RBP15.14■□□□□ 0.01
RTN1-202ENST00000342503 HIST1H2BLQ99880 126 aa15.14■□□□□ 0.01
RTN1-202ENST00000342503 A8MWP6 167 aa15.13■□□□□ 0.01
RTN1-202ENST00000342503 LGALS9O00182 355 aa15.13■□□□□ 0.01
RTN1-202ENST00000342503 ZNF705DP0CH99 300 aaPredicted RBP15.13■□□□□ 0.01
RTN1-202ENST00000342503 ZNF705BP0CI00 300 aaPredicted RBP15.13■□□□□ 0.01
RTN1-202ENST00000342503 TCTEX1D4Q5JR98 221 aa15.13■□□□□ 0.01
RTN1-202ENST00000342503 TMEM256Q8N2U0 113 aa15.13■□□□□ 0.01
RTN1-202ENST00000342503 OR10D4PQ8NGN7 298 aa15.13■□□□□ 0.01
RTN1-202ENST00000342503 SSBP4Q9BWG4 385 aaPredicted RBP15.13■□□□□ 0.01
RTN1-202ENST00000342503 TP53TG3Q9ULZ0 132 aa15.13■□□□□ 0.01
RTN1-202ENST00000342503 OVOL1O14753 267 aa15.12■□□□□ 0.01
RTN1-202ENST00000342503 FABP5P3A8MUU1 101 aa15.12■□□□□ 0.01
RTN1-202ENST00000342503 SMIM6P0DI80 62 aa15.12■□□□□ 0.01
RTN1-202ENST00000342503 SMR3AQ99954 134 aa15.12■□□□□ 0.01
RTN1-202ENST00000342503 PPP1R14DQ9NXH3 145 aa15.12■□□□□ 0.01
RTN1-202ENST00000342503 SONP18583 2426 aaKnown RBP15.11■□□□□ 0.01
RTN1-202ENST00000342503 AMBPP02760 352 aa15.11■□□□□ 0.01
RTN1-202ENST00000342503 Q0VG73 95 aa15.11■□□□□ 0.01
RTN1-202ENST00000342503 DEFB136Q30KP8 78 aa15.11■□□□□ 0.01
RTN1-202ENST00000342503 PRR31Q5SQ13 230 aa15.11■□□□□ 0.01
RTN1-202ENST00000342503 NUPR1O60356 82 aa15.1■□□□□ 0.01
RTN1-202ENST00000342503 ARMS2P0C7Q2 107 aa15.1■□□□□ 0.01
RTN1-202ENST00000342503 SRIP30626 198 aa15.1■□□□□ 0.01
RTN1-202ENST00000342503 DEFB1P60022 68 aa15.1■□□□□ 0.01
RTN1-202ENST00000342503 RPS20P60866 119 aaKnown RBP15.1■□□□□ 0.01
RTN1-202ENST00000342503 SRSF2Q01130 221 aaKnown RBP15.1■□□□□ 0.01
RTN1-202ENST00000342503 Q6AWC8 147 aa15.1■□□□□ 0.01
RTN1-202ENST00000342503 TPPP3Q9BW30 176 aa15.1■□□□□ 0.01
RTN1-202ENST00000342503 TMEM160Q9NX00 188 aa15.1■□□□□ 0.01
RTN1-202ENST00000342503 A0A1B0GUT8 65 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 F2Z2F3 143 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 SLURP1P55000 103 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 SCGB2A2Q13296 93 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 KLF5Q13887 457 aaPredicted RBP15.09■□□□□ 0.01
RTN1-202ENST00000342503 OR10J6PQ8NGY7 276 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 PACRGQ96M98 296 aaPredicted RBP15.09■□□□□ 0.01
RTN1-202ENST00000342503 ORM1P02763 201 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 RIGQ13278 110 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 KHDC1LQ5JSQ8 128 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 LCE2DQ5TA82 110 aaPredicted RBP15.09■□□□□ 0.01
RTN1-202ENST00000342503 BAGE3Q86Y29 109 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 WFDC3Q8IUB2 231 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 DCANP1Q8TF63 244 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 C4orf3Q8WVX3 66 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 LINC00477Q96M19 166 aa15.09■□□□□ 0.01
RTN1-202ENST00000342503 FASNP49327 2511 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms