RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 M0R3E3 92 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 IFNA5P01569 189 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 ZNF266Q14584 549 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 RNF212Q495C1 297 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 TMUB2Q71RG4 321 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 MIR17HGQ75NE6 70 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 TMEM263Q8WUH6 116 aaKnown RBP14.22□□□□□ -0.13
SYNE2-201ENST00000341472 LINC00477Q96M19 166 aa14.22□□□□□ -0.13
SYNE2-201ENST00000341472 NOP10Q9NPE3 64 aaKnown RBP14.22□□□□□ -0.13
SYNE2-201ENST00000341472 BORCS7-ASMTA0A0B4J1R7 106 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 KANTRA0A1W2PQU2 76 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 C17orf112F2Z3M2 114 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 ATP5G1P05496 136 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 ATP5G3P48201 142 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 C15orf53Q8NAA6 179 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 RNASE8Q8TDE3 154 aaKnown RBP14.21□□□□□ -0.13
SYNE2-201ENST00000341472 FAM167A-AS1Q96KT0 104 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 ARPC5LQ9BPX5 153 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 SLC25A2Q9BXI2 301 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 SMIM3Q9BZL3 60 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 OR51M1Q9H341 326 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 AAMDCQ9H7C9 122 aa14.21□□□□□ -0.13
SYNE2-201ENST00000341472 TRAV12-3A0A0B4J271 114 aa14.2□□□□□ -0.14
SYNE2-201ENST00000341472 NBEAP1P0C6P0 100 aa14.2□□□□□ -0.14
SYNE2-201ENST00000341472 ERCC8Q13216 396 aa14.2□□□□□ -0.14
SYNE2-201ENST00000341472 LINC00336Q6ZUF6 198 aa14.2□□□□□ -0.14
SYNE2-201ENST00000341472 EXOC3-AS1Q8N2X6 119 aa14.2□□□□□ -0.14
SYNE2-201ENST00000341472 C9orf62Q8N4C0 152 aa14.2□□□□□ -0.14
SYNE2-201ENST00000341472 SCGB1C1Q8TD33 95 aa14.2□□□□□ -0.14
SYNE2-201ENST00000341472 BCL2L11O43521 198 aa14.19□□□□□ -0.14
SYNE2-201ENST00000341472 EIF5AP63241 154 aaKnown RBP14.19□□□□□ -0.14
SYNE2-201ENST00000341472 ICAM4Q14773 271 aa14.19□□□□□ -0.14
SYNE2-201ENST00000341472 LGALS9BQ3B8N2 356 aa14.19□□□□□ -0.14
SYNE2-201ENST00000341472 MRPL32Q9BYC8 188 aaKnown RBP14.19□□□□□ -0.14
SYNE2-201ENST00000341472 AGPAT4-IT1Q9H0P7 198 aa14.19□□□□□ -0.14
SYNE2-201ENST00000341472 SLC25A5P05141 298 aaKnown RBP14.18□□□□□ -0.14
SYNE2-201ENST00000341472 NKX2-5P52952 324 aaPredicted RBP14.18□□□□□ -0.14
SYNE2-201ENST00000341472 RNF141Q8WVD5 230 aa14.18□□□□□ -0.14
SYNE2-201ENST00000341472 PYGO2Q9BRQ0 406 aa14.18□□□□□ -0.14
SYNE2-201ENST00000341472 PAXXQ9BUH6 204 aa14.18□□□□□ -0.14
SYNE2-201ENST00000341472 WFDC1Q9HC57 220 aa14.18□□□□□ -0.14
SYNE2-201ENST00000341472 FUT9Q9Y231 359 aa14.18□□□□□ -0.14
SYNE2-201ENST00000341472 DNAH2Q9P225 4427 aa14.18□□□□□ -0.14
SYNE2-201ENST00000341472 IGLV2-18A0A075B6J9 118 aa14.17□□□□□ -0.14
SYNE2-201ENST00000341472 ATG101Q9BSB4 218 aa14.17□□□□□ -0.14
SYNE2-201ENST00000341472 DNAH17Q9UFH2 4485 aa14.17□□□□□ -0.14
SYNE2-201ENST00000341472 C7orf71A4D174 169 aa14.16□□□□□ -0.14
SYNE2-201ENST00000341472 SNURFLB1AK76 121 aa14.16□□□□□ -0.14
SYNE2-201ENST00000341472 NUDT3O95989 172 aa14.16□□□□□ -0.14
SYNE2-201ENST00000341472 FAM122CQ6P4D5 195 aa14.16□□□□□ -0.14
SYNE2-201ENST00000341472 C9orf47Q6ZRZ4 202 aa14.16□□□□□ -0.14
SYNE2-201ENST00000341472 FXYD5Q96DB9 178 aa14.16□□□□□ -0.14
SYNE2-201ENST00000341472 CYTL1Q9NRR1 136 aa14.16□□□□□ -0.14
SYNE2-201ENST00000341472 OR10J4P0C629 311 aa14.15□□□□□ -0.14
SYNE2-201ENST00000341472 RNASE4P34096 147 aaKnown RBP14.15□□□□□ -0.14
SYNE2-201ENST00000341472 FAM3BP58499 235 aaPredicted RBP14.15□□□□□ -0.14
SYNE2-201ENST00000341472 FFAR4Q5NUL3 377 aa14.15□□□□□ -0.14
SYNE2-201ENST00000341472 RPL7L1Q6DKI1 246 aaKnown RBP14.15□□□□□ -0.14
SYNE2-201ENST00000341472 FAM19A4Q96LR4 140 aa14.15□□□□□ -0.14
SYNE2-201ENST00000341472 ZNF471Q9BX82 626 aaPredicted RBP14.15□□□□□ -0.14
SYNE2-201ENST00000341472 GAGE12BA1L429 117 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 KLLNB2CW77 178 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 GAGE7O76087 117 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 GAGE12FP0CL80 117 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 GAGE12GP0CL81 117 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 GAGE12IP0CL82 117 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 TMEM78Q5T7P6 136 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 SLC51BQ86UW2 128 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 LINC00612Q8N6U2 182 aa14.14□□□□□ -0.15
SYNE2-201ENST00000341472 GNPNAT1Q96EK6 184 aaPredicted RBP14.14□□□□□ -0.15
SYNE2-201ENST00000341472 IGKV2-40A0A087WW87 121 aaPredicted RBP14.13□□□□□ -0.15
SYNE2-201ENST00000341472 OR7C2O60412 319 aa14.13□□□□□ -0.15
SYNE2-201ENST00000341472 ZNF324O75467 553 aaPredicted RBP14.13□□□□□ -0.15
SYNE2-201ENST00000341472 IGKV2D-40P01614 121 aaPredicted RBP14.13□□□□□ -0.15
SYNE2-201ENST00000341472 GPX1P07203 203 aa14.13□□□□□ -0.15
SYNE2-201ENST00000341472 NMBP08949 121 aa14.13□□□□□ -0.15
SYNE2-201ENST00000341472 CRISP2P16562 243 aa14.13□□□□□ -0.15
SYNE2-201ENST00000341472 RANP62826 216 aaKnown RBP14.13□□□□□ -0.15
SYNE2-201ENST00000341472 DAZ2Q13117 558 aaKnown RBP14.13□□□□□ -0.15
SYNE2-201ENST00000341472 OR5I1Q13606 314 aa14.13□□□□□ -0.15
SYNE2-201ENST00000341472 VGLL1Q99990 258 aa14.13□□□□□ -0.15
SYNE2-201ENST00000341472 TPT1P13693 172 aaKnown RBP14.12□□□□□ -0.15
SYNE2-201ENST00000341472 CSN1S1P47710 185 aa14.12□□□□□ -0.15
SYNE2-201ENST00000341472 BTN1A1Q13410 526 aa14.12□□□□□ -0.15
SYNE2-201ENST00000341472 Q6ZR54 194 aa14.12□□□□□ -0.15
SYNE2-201ENST00000341472 LINC00467Q9BRT7 94 aa14.12□□□□□ -0.15
SYNE2-201ENST00000341472 FAT2Q9NYQ8 4349 aa14.12□□□□□ -0.15
SYNE2-201ENST00000341472 HECTD4Q9Y4D8 3996 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 RTL8CO15255 209 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 CCL18P55774 89 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 TAS2R45P59539 299 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 LYPD1Q8N2G4 141 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 HSD17B11Q8NBQ5 300 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 ZNF680Q8NEM1 530 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 STOML3Q8TAV4 291 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 PHYHIPLQ96FC7 376 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 PSMG3Q9BT73 122 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-201ENST00000341472 GSN-AS1Q9NRJ2 163 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 ZNF492Q9P255 531 aa14.11□□□□□ -0.15
SYNE2-201ENST00000341472 PRSS29PA6NIE9 313 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms