RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 PAX2Q02962 417 aa7.45□□□□□ -1.22
TRERF1-201ENST00000340840 SAMD5Q5TGI4 173 aa7.45□□□□□ -1.22
TRERF1-201ENST00000340840 PRR25Q96S07 402 aa7.45□□□□□ -1.22
TRERF1-201ENST00000340840 SELENOKQ9Y6D0 94 aa7.45□□□□□ -1.22
TRERF1-201ENST00000340840 ZNF207O43670 478 aaKnown RBP7.44□□□□□ -1.22
TRERF1-201ENST00000340840 FSTL3O95633 263 aa7.44□□□□□ -1.22
TRERF1-201ENST00000340840 IGKCP01834 107 aa7.44□□□□□ -1.22
TRERF1-201ENST00000340840 C22orf34Q6ZV56 151 aa7.44□□□□□ -1.22
TRERF1-201ENST00000340840 BCL6BQ8N143 479 aaPredicted RBP7.44□□□□□ -1.22
TRERF1-201ENST00000340840 K7EP34 96 aa7.44□□□□□ -1.22
TRERF1-201ENST00000340840 NPYP01303 97 aa7.44□□□□□ -1.22
TRERF1-201ENST00000340840 IGHV3OR16-8A0A075B7F1 116 aa7.44□□□□□ -1.22
TRERF1-201ENST00000340840 TTC9CQ8N5M4 171 aa7.44□□□□□ -1.22
TRERF1-201ENST00000340840 NHP2Q9NX24 153 aaKnown RBP7.44□□□□□ -1.22
TRERF1-201ENST00000340840 HIST1H4GQ99525 98 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 FAM106CPP0CH98 169 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 EVI2AP22794 236 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 PRORYQ9H606 182 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 ANKHD1Q8IWZ3 2542 aaKnown RBP7.43□□□□□ -1.22
TRERF1-201ENST00000340840 MUC3AQ02505 3323 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 ZNF672Q499Z4 452 aaPredicted RBP7.43□□□□□ -1.22
TRERF1-201ENST00000340840 ZNF493Q6ZR52 646 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 BOD1L2Q8IYS8 172 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 METTL26Q96S19 204 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 SPOCK3Q9BQ16 436 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 SLC50A1Q9BRV3 221 aa7.43□□□□□ -1.22
TRERF1-201ENST00000340840 ABCA12Q86UK0 2595 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 NDUFS7O75251 213 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 IGLV2-11P01706 119 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 THBDP07204 575 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 PPIFP30405 207 aaKnown RBP7.42□□□□□ -1.22
TRERF1-201ENST00000340840 IGF2-ASQ6U949 168 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 ZNF562Q6V9R5 426 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 PTPRBP23467 1997 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 CRYGBP07316 175 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 RPL11P62913 178 aaKnown RBP7.42□□□□□ -1.22
TRERF1-201ENST00000340840 OR11H12B2RN74 326 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 CLEC3BP05452 202 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 PRSS57Q6UWY2 283 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 OR11H1Q8NG94 326 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 OR11H2Q8NH07 326 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 CFAP54Q96N23 3096 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 HECTD1Q9ULT8 2610 aa7.42□□□□□ -1.22
TRERF1-201ENST00000340840 ZC2HC1BQ5TFG8 222 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 GTSCR1Q86UQ5 136 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 VKORC1Q9BQB6 163 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 CHAC1Q9BUX1 264 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 A0A1W2PPM0 123 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 EGR2P11161 476 aaPredicted RBP7.41□□□□□ -1.22
TRERF1-201ENST00000340840 IGFL4Q6B9Z1 124 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 SCGB1D4Q6XE38 83 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 ZNF843Q8N446 348 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 TMEM158Q8WZ71 300 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 IGHV3OR16-13A0A075B7E8 117 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 IGHV3-74A0A0B4J1X5 117 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 ATP5J2P56134 94 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 LOXL1Q08397 574 aaPredicted RBP7.41□□□□□ -1.22
TRERF1-201ENST00000340840 RUSC1-AS1Q66K80 236 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 PCP2Q8IVA1 136 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 DKK2Q9UBU2 259 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.41□□□□□ -1.22
TRERF1-201ENST00000340840 KLRD1Q13241 179 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 C16orf92Q96LL3 132 aa7.41□□□□□ -1.22
TRERF1-201ENST00000340840 WI2-2373I1.2A0A1W2PRP0 233 aa7.4□□□□□ -1.22
TRERF1-201ENST00000340840 FAM106AQ4KMX7 169 aa7.4□□□□□ -1.22
TRERF1-201ENST00000340840 LYRM7Q5U5X0 104 aa7.4□□□□□ -1.22
TRERF1-201ENST00000340840 SHISA9B4DS77 424 aa7.4□□□□□ -1.22
TRERF1-201ENST00000340840 J3KRW8 73 aa7.4□□□□□ -1.22
TRERF1-201ENST00000340840 SMIM17P0DL12 118 aa7.4□□□□□ -1.22
TRERF1-201ENST00000340840 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.22
TRERF1-201ENST00000340840 SPEGQ15772 3267 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 HIVEP3Q5T1R4 2406 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 TMEM238LA0A1B0GVL6 79 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 A6NJY4 79 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 OOSP1A8MZH6 123 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 M0R1W7 72 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 VGLL1Q99990 258 aa7.4□□□□□ -1.23
TRERF1-201ENST00000340840 SAP30O75446 220 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 PRTN3P24158 256 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 SRSF1Q07955 248 aaKnown RBP eCLIP7.39□□□□□ -1.23
TRERF1-201ENST00000340840 SRSF9Q13242 221 aaKnown RBP eCLIP7.39□□□□□ -1.23
TRERF1-201ENST00000340840 LAGE3Q14657 143 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 EEF1AKMT3Q96AZ1 226 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 ZNF479Q96JC4 524 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 KLK15Q9H2R5 256 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 DSCAML1Q8TD84 2053 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 CRIP1P50238 77 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 GATD1Q8NB37 220 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 CSTL1Q9H114 145 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 IGHV3-49A0A0A0MS15 119 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 MGPP08493 103 aa7.39□□□□□ -1.23
TRERF1-201ENST00000340840 NDUFA3O95167 84 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 HERVK_113P61574 105 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 C15orf32Q32M92 178 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 SAMD13Q5VXD3 122 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 VMO1Q7Z5L0 202 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 Q8N8P6 123 aa7.38□□□□□ -1.23
TRERF1-201ENST00000340840 SCGB3A1Q96QR1 104 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms